RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 TMED4Q7Z7H5 227 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 B3GNT8Q7Z7M8 397 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF280BQ86YH2 543 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 MTURNQ8N3F0 131 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CPXM2Q8N436 756 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 GDPD1Q8N9F7 314 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 NECAP1Q8NC96 275 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PIGXQ8TBF5 258 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 FUZQ9BT04 418 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 GABARAPL1Q9H0R8 117 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TSPAN10Q9H1Z9 355 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CLEC4MQ9H2X3 399 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 DSN1Q9H410 356 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TPT1P8Q9HAU6 139 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 RAD18Q9NS91 495 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PAK1IP1Q9NWT1 392 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 RBM7Q9Y580 266 aaKnown RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 KCNMB2Q9Y691 235 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 LAMA5O15230 3695 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CLDN24A6NM45 220 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 SGK494L7N484 410 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 M0R143 59 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 KLK10O43240 276 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CBX7O95931 251 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 AQP2P41181 271 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 KRT33BQ14525 404 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PDCD1Q15116 288 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ZNF404Q494X3 552 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CATSPEREQ5SY80 951 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 NCMAPQ5T1S8 102 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ARTNQ5T4W7 220 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 C9orf135Q5VTT2 229 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 GDF6Q6KF10 455 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CAPN13Q6MZZ7 669 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 SBSNQ6UWP8 590 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 NHLRC1Q6VVB1 395 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TTLL10Q6ZVT0 673 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 OR4C6Q8NH72 309 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 RHOXF1Q8NHV9 184 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 KCNG3Q8TAE7 436 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 C11orf40Q8WZ69 217 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 DCLRE1CQ96SD1 692 aaKnown RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 NXF2Q9GZY0 626 aaKnown RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PLA2G3Q9NZ20 509 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 LPAR3Q9UBY5 353 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TBX21Q9UL17 535 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PCDHB14Q9Y5E9 798 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TRAV26-1A0A087WT03 109 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 C1orf196B1AJZ1 125 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 AIREO43918 545 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 IGLV3-27P01718 113 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 HIST1H2AGP0C0S8 130 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 BCKDHAP12694 445 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CSNK2A2P19784 350 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 HIST1H2ADP20671 130 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TBXA2RP21731 343 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 RPS3P23396 243 aaKnown RBP eCLIP6.04□□□□□ -1.443e-7■■□□□ 14.4
TM9SF4-202ENST00000398022 KIR3DL1P43629 444 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 IDH2P48735 452 aaKnown RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 INPP1P49441 399 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 EVX1P49640 407 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PDLIM4P50479 330 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CDC42P60953 191 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 RHOAP61586 193 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 INSM1Q01101 510 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 IFITM3Q01628 133 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ZFP36L1Q07352 338 aaKnown RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PROX2Q3B8N5 592 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 AHSA2Q719I0 299 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 GAREM2Q75VX8 874 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 SERPINA9Q86WD7 417 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PAQR7Q86WK9 346 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 KRTCAP2Q8N6L1 136 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 OR6K3Q8NGY3 331 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 NETO1Q8TDF5 533 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 YIPF6Q96EC8 236 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 HIST1H2AHQ96KK5 128 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 HIST1H2AJQ99878 128 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 H2AFJQ9BTM1 129 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ALG12Q9BV10 488 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 ALG8Q9BVK2 526 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 LYRM4Q9HD34 91 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 POLE4Q9NR33 117 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TM7SF3Q9NS93 570 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 CUTCQ9NTM9 273 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 KIF25Q9UIL4 384 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 FZD4Q9ULV1 537 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TSSC4Q9Y5U2 329 aaPredicted RBP6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 PTPRDP23468 1912 aa6.04□□□□□ -1.44
TM9SF4-202ENST00000398022 TCF20Q9UGU0 1960 aaKnown RBP6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 GJE1A6NN92 205 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 PROB1E7EW31 1015 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 CA11O75493 328 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 SLC25A14O95258 325 aaPredicted RBP6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 EFEMP2O95967 443 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 F13BP05160 661 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 SMIM10L1P0DMW3 83 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 NCS1P62166 190 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 RBBP4Q09028 425 aa6.03□□□□□ -1.44
TM9SF4-202ENST00000398022 CNTN1Q12860 1018 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms