RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 HMGCS1Q01581 520 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 NCBP1Q09161 790 aaKnown RBP2.33□□□□□ -2.04
CMC1-202ENST00000396610 GNMTQ14749 295 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 PDK3Q15120 406 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 EXOC3L2Q2M3D2 409 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 GALNT17Q6IS24 598 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 LINC00173Q6ZV60 143 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 STEAP2Q8NFT2 490 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 SGK3Q96BR1 496 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 TRIM44Q96DX7 344 aaPredicted RBP2.33□□□□□ -2.04
CMC1-202ENST00000396610 MS4A4EQ96PG1 132 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 CTRCQ99895 268 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 TRIM62Q9BVG3 475 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 TM9SF3Q9HD45 589 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 INPP5EQ9NRR6 644 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 CDH9Q9ULB4 789 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 MROH7-TTC4A0A0A0MT08 1334 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 NFASCO94856 1347 aa2.33□□□□□ -2.04
CMC1-202ENST00000396610 SLIT3O75094 1523 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 IGKV1D-13A0A0B4J2D9 117 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 CIB4A0PJX0 185 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 H3BNH8 94 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 MTX2O75431 263 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 UPK3AO75631 287 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 MRPL3P09001 348 aaKnown RBP2.32□□□□□ -2.04
CMC1-202ENST00000396610 TLX1NBP0CAT3 122 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 IGKV1-13P0DP09 117 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 TCN1P20061 433 aaPredicted RBP2.32□□□□□ -2.04
CMC1-202ENST00000396610 MAGEA8P43361 318 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 GPR6P46095 362 aaPredicted RBP2.32□□□□□ -2.04
CMC1-202ENST00000396610 GYG1P46976 350 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 SCRN3Q0VDG4 424 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 SHHQ15465 462 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 LY6EQ16553 131 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 DGUOKQ16854 277 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 TTLL9Q3SXZ7 439 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 ABCA11PQ4W5N1 156 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 LY6G6FQ5SQ64 297 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 TRIM40Q6P9F5 258 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 TRIM69Q86WT6 500 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 TTC5Q8N0Z6 440 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 ZNF721Q8TF20 911 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 SDR42E1Q8WUS8 393 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 SCFD1Q8WVM8 642 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 PSKH2Q96QS6 385 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 OR8B4Q96RC9 309 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 PANX2Q96RD6 677 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 RTBDNQ9BSG5 229 aaPredicted RBP2.32□□□□□ -2.04
CMC1-202ENST00000396610 TMEM43Q9BTV4 400 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 RSPO3Q9BXY4 272 aaPredicted RBP2.32□□□□□ -2.04
CMC1-202ENST00000396610 GABARAPL3Q9BY60 117 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 PPA2Q9H2U2 334 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 NOX3Q9HBY0 568 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 MCCC2Q9HCC0 563 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 SLC40A1Q9NP59 571 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 EXD2Q9NVH0 621 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 OPN4Q9UHM6 478 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 PACSIN2Q9UNF0 486 aaPredicted RBP2.32□□□□□ -2.04
CMC1-202ENST00000396610 YTHDF2Q9Y5A9 579 aaKnown RBP2.32□□□□□ -2.04
CMC1-202ENST00000396610 PNPLA6Q8IY17 1366 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 PCM1Q15154 2024 aa2.32□□□□□ -2.04
CMC1-202ENST00000396610 LRP4O75096 1905 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 C15orf38-AP3S2A0A0A6YYH1 394 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 XKRYO14609 159 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 ZNF208O43345 1280 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 FCMRO60667 390 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 ENTPD5O75356 428 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 FOXH1O75593 365 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 OR7A10O76100 309 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 CTDNEP1O95476 244 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 ZDHHC11BP0C7U3 371 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 SLC2A5P22732 501 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 RORAP35398 523 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 SLC7A9P82251 487 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 PMF1Q6P1K2 205 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 UTS2BQ765I0 119 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 ZNF557Q8N988 423 aaPredicted RBP2.31□□□□□ -2.04
CMC1-202ENST00000396610 FAM83FQ8NEG4 500 aaPredicted RBP2.31□□□□□ -2.04
CMC1-202ENST00000396610 OR52M1Q8NGK5 317 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 GEMIN6Q8WXD5 167 aaKnown RBP2.31□□□□□ -2.04
CMC1-202ENST00000396610 FRZBQ92765 325 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 EXOSC8Q96B26 276 aaKnown RBP2.31□□□□□ -2.04
CMC1-202ENST00000396610 FAIM2Q9BWQ8 316 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 ZNF430Q9H8G1 570 aaPredicted RBP2.31□□□□□ -2.04
CMC1-202ENST00000396610 NMRAL1Q9HBL8 299 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 OR12D3Q9UGF7 316 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 ZNF835Q9Y2P0 537 aa2.31□□□□□ -2.04
CMC1-202ENST00000396610 A0A1B0GVI7 797 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 TMEM150BA6NC51 233 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 INS-IGF2F8WCM5 200 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 GAPDHP04406 335 aaKnown RBP2.3□□□□□ -2.04
CMC1-202ENST00000396610 FGF1P05230 155 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 ZNF286BP0CG31 522 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 GLRA2P23416 452 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 OMGP23515 440 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 FDFT1P37268 417 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 PRPHP41219 470 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 IRX3P78415 501 aaPredicted RBP2.3□□□□□ -2.04
CMC1-202ENST00000396610 AQP6Q13520 282 aa2.3□□□□□ -2.04
CMC1-202ENST00000396610 C19orf35Q6ZS72 473 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms