RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 FLVCR1-AS1Q8TAF5 88 aa19.26■□□□□ 0.67
UPF3A-202ENST00000375299 ST8SIA2Q92186 375 aa19.26■□□□□ 0.67
UPF3A-202ENST00000375299 HOXB13Q92826 284 aaPredicted RBP19.26■□□□□ 0.67
UPF3A-202ENST00000375299 ADAD1Q96M93 576 aaKnown RBP19.26■□□□□ 0.67
UPF3A-202ENST00000375299 SRMSQ9H3Y6 488 aa19.26■□□□□ 0.67
UPF3A-202ENST00000375299 CTAG2O75638 210 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 EML2O95834 649 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 IGKV1D-16P01601 117 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 IFI6P09912 130 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 MGMTP16455 207 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 IGFALSP35858 605 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 WASP42768 502 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 YOD1Q5VVQ6 348 aaPredicted RBP19.25■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF595Q8IYB9 648 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 FGF13Q92913 245 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 SLC22A18Q96BI1 424 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 LRRC46Q96FV0 321 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 ASB16Q96NS5 453 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 PBX4Q9BYU1 374 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 DNTTIP1Q9H147 329 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 EXO5Q9H790 373 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 TBC1D29Q9UFV1 150 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 PILRAQ9UKJ1 303 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF346Q9UL40 294 aaKnown RBP19.25■□□□□ 0.67
UPF3A-202ENST00000375299 MOKQ9UQ07 419 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 TRAV14DV4A0A0A6YYC5 116 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 CYR61O00622 381 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 ABHD16AO95870 558 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 PLATP00750 562 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 SGCGQ13326 291 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 LINC00518Q8N0U6 118 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 OR5T3Q8NGG3 340 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 OR10K1Q8NGX5 313 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF417Q8TAU3 575 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 STK35Q8TDR2 534 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 CHST6Q9GZX3 395 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 RASL12Q9NYN1 266 aa19.25■□□□□ 0.67
UPF3A-202ENST00000375299 COL4A2P08572 1712 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 A0A087WUJ7 227 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 TRBV5-7A0A0A0MS05 114 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 C4orf47A7E2U8 309 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 MPTX1A8MV57 137 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 CDKN2AP42771 156 aaKnown RBP19.24■□□□□ 0.67
UPF3A-202ENST00000375299 RPS4XP62701 263 aaKnown RBP19.24■□□□□ 0.67
UPF3A-202ENST00000375299 PSG6Q00889 435 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 FCRL6Q6DN72 434 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 VITQ6UXI7 678 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 OR4N2Q8NGD1 307 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 GPX7Q96SL4 187 aaPredicted RBP19.24■□□□□ 0.67
UPF3A-202ENST00000375299 PLCL2Q9UPR0 1127 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 MEIS3P1A6NDR6 274 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 H0YC42 278 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF254O75437 659 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 POU2F2P09086 479 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 EFNB2P52799 333 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 PRPS1P60891 318 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 EIF2B5Q13144 721 aaKnown RBP19.24■□□□□ 0.67
UPF3A-202ENST00000375299 TCEA2Q15560 299 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 NKAIN2Q5VXU1 208 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 JAZF1Q86VZ6 243 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 DUSP19Q8WTR2 217 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 APOOQ9BUR5 198 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 FGF22Q9HCT0 170 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 SLC6A5Q9Y345 797 aa19.24■□□□□ 0.67
UPF3A-202ENST00000375299 CHD9Q3L8U1 2897 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 A0A1B0GTH9 108 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 ABCD4O14678 606 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 SIGLEC5O15389 551 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 ZNF432O94892 652 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 SLC25A1P53007 311 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 SIGLEC14Q08ET2 396 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 DGAT2L6Q6ZPD8 337 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 TSSK2Q96PF2 358 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 ALX4Q9H161 411 aaPredicted RBP19.23■□□□□ 0.67
UPF3A-202ENST00000375299 C1orf198Q9H425 327 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 PRELID3BQ9Y3B1 194 aa19.23■□□□□ 0.67
UPF3A-202ENST00000375299 TBC1D3IA0A087WXS9 549 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 GRXCR1A8MXD5 290 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 TNFSF14O43557 240 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 EIF4E2O60573 245 aaKnown RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 CD3DP04234 171 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 ACHEP22303 614 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 CTAG1AP78358 180 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 DEFA5Q01523 94 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 FLI1Q01543 452 aaPredicted RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 KIR2DS3Q14952 304 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 PDGFRLQ15198 375 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 SDR16C5Q8N3Y7 309 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 EXD3Q8N9H8 876 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 OR51D1Q8NGF3 324 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 OR5T2Q8NGG2 359 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 LMF2Q9BU23 707 aaKnown RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 BARX1Q9HBU1 254 aaPredicted RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 CDV3Q9UKY7 258 aaKnown RBP19.22■□□□□ 0.67
UPF3A-202ENST00000375299 TRAV18A0A075B6X5 111 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 LINC01553A4QN01 128 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 FAM74A7A6NL05 159 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 OR4C45A6NMZ5 311 aa19.22■□□□□ 0.67
UPF3A-202ENST00000375299 GUSBP08236 651 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms