RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 LYPD3O95274 346 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 AKAIN1P0CW23 69 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 ZIC1Q15915 447 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 C2orf68Q2NKX9 166 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 PCGF3Q3KNV8 242 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 AMZ1Q400G9 498 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 DCAF12L2Q5VW00 463 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 C18orf63Q68DL7 685 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 ZNF613Q6PF04 617 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 ZNF546Q86UE3 836 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 PDCD10Q9BUL8 212 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 ESRP2Q9H6T0 727 aaKnown RBP17.39■□□□□ 0.37
CMTM3-201ENST00000361909 FGF22Q9HCT0 170 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 TMEM138Q9NPI0 162 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 POT1Q9NUX5 634 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 ZNF780BQ9Y6R6 833 aa17.39■□□□□ 0.37
CMTM3-201ENST00000361909 TMEM218A2RU14 115 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 OR14I1A6ND48 311 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 XRCC3O43542 346 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 FCMRO60667 390 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 IGHV4-34P06331 123 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 SLC25A4P12235 298 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 DCDP81605 110 aaKnown RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 DUSP2Q05923 314 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 OR1Q1Q15612 314 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 PAN3Q58A45 887 aaKnown RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 MFSD12Q6NUT3 480 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 C7orf57Q8NEG2 295 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 TMEM185AQ8NFB2 350 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 DMBX1Q8NFW5 382 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 OR14A16Q8NHC5 309 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 SLC35A4Q96G79 324 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 OR2M4Q96R27 311 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 C20orf141Q9NUB4 165 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 GNG8Q9UK08 70 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 CYP8B1Q9UNU6 501 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 CARHSP1Q9Y2V2 147 aaKnown RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 A0A1W2PPV9 198 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 GLOD5A6NK44 160 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 DBIP07108 87 aaKnown RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 CLUP10909 449 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 RPS4Y1P22090 263 aaKnown RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 NR0B1P51843 470 aaKnown RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 TMEM31Q5JXX7 168 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 C10orf91Q5T1B1 145 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 ELP2Q6IA86 826 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 ENPP7Q6UWV6 458 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 WDR88Q6ZMY6 472 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 SERPINA12Q8IW75 414 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 SLC35F3Q8IY50 421 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 ZNF433Q8N7K0 673 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 C6orf106Q9H6K1 298 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-201ENST00000361909 PLEKHM1Q9Y4G2 1056 aa17.38■□□□□ 0.37
CMTM3-201ENST00000361909 TRAV14DV4A0A0A6YYC5 116 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 A0A0G2JN53 185 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 TMEM272A0A1B0GTI8 110 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 C19orf67A6NJJ6 358 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 PPP1R3DO95685 299 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 RABIFP47224 123 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 PPIAP62937 165 aaKnown RBP17.37■□□□□ 0.37
CMTM3-201ENST00000361909 SLC35D3Q5M8T2 416 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 SLC6A19Q695T7 634 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 SKA3Q8IX90 412 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 UBALD2Q8IYN6 164 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 C12orf45Q8N5I9 185 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-201ENST00000361909 ACOT4Q8N9L9 421 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 OR9A2Q8NGT5 310 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 FAM174AQ8TBP5 190 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 RBM18Q96H35 190 aaKnown RBP17.37■□□□□ 0.37
CMTM3-201ENST00000361909 INSM2Q96T92 566 aaPredicted RBP17.37■□□□□ 0.37
CMTM3-201ENST00000361909 MENTQ9BUN1 341 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 NCDNQ9UBB6 729 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 KCNK6Q9Y257 313 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 ATG4BQ9Y4P1 393 aa17.37■□□□□ 0.37
CMTM3-201ENST00000361909 H0Y8X5 98 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 RDH16O75452 317 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 PRKRAO75569 313 aaKnown RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 HEXAP06865 529 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 SMIM6P0DI80 62 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 HTR2AP28223 471 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 OC90Q02509 493 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 MELKQ14680 651 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 GLT8D1Q68CQ7 371 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 JMJD6Q6NYC1 403 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 DND1Q8IYX4 353 aaKnown RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 PUSL1Q8N0Z8 303 aaKnown RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 OR2L13Q8N349 312 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 RFLNBQ8N5W9 214 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 OR1E3Q8WZA6 343 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 ZNF681Q96N22 645 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 SMAD5Q99717 465 aaKnown RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 SLC25A18Q9H1K4 315 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 C2orf42Q9NWW7 574 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 TP53BP1Q12888 1972 aaPredicted RBP17.36■□□□□ 0.37
CMTM3-201ENST00000361909 SNAPINO95295 136 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 FUT1P19526 365 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 CSF2RBP32927 897 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 GPR143P51810 404 aa17.36■□□□□ 0.37
CMTM3-201ENST00000361909 SNTB1Q13884 538 aaKnown RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms