RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 TRABD2BA6NFA1 517 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 NME2P22392 152 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ACOT4Q8N9L9 421 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ERVMER34-1Q9H9K5 563 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 WNT6Q9Y6F9 365 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 TRIM77I1YAP6 450 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 RAB33AQ14088 237 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 MBTPS1Q14703 1052 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 OXA1LQ15070 435 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 FIBINQ8TAL6 211 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 FAM174AQ8TBP5 190 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ARSGQ96EG1 525 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 SPACA1Q9HBV2 294 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF230Q9UIE0 474 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 DOCK5Q9H7D0 1870 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF93P35789 620 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 NHSL2Q5HYW2 709 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 NPSR1Q6W5P4 371 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 DPY19L2P2Q6ZN68 376 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 OR13C2Q8NGS9 318 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 OR7D2Q96RA2 312 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 URGCP-MRPS24S4R325 110 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 MGMTP16455 207 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 CLINT1Q14677 625 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 OR14A16Q8NHC5 309 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ATXN7L1Q9ULK2 861 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 CBY3A6NI87 242 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ZFP92A6NM28 416 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 CSF3P09919 207 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 GCAP28676 217 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 IL34Q6ZMJ4 242 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 NPRL2Q8WTW4 380 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ZMAT5Q9UDW3 170 aaKnown RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 PLCH1Q4KWH8 1693 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 CD79AP11912 226 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 IAH1Q2TAA2 248 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ADIPOR2Q86V24 386 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 OSTM1Q86WC4 334 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 LGI3Q8N145 548 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 NPWQ8N729 165 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 CABLES2Q9BTV7 478 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ELNP15502 786 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 SFXN1Q9H9B4 322 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 POLR2AP24928 1970 aaKnown RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 TRAV27A0A087WT01 109 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 SNRPGP15A8MWD9 76 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 ZIC2O95409 532 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 CHRM2P08172 466 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 HHEXQ03014 270 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 STK11Q15831 433 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 TMEM183BQ1AE95 376 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 TIGITQ495A1 244 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 GHSRQ92847 366 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 TMEM38AQ9H6F2 299 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 C8orf33Q9H7E9 229 aaPredicted RBP17.99■□□□□ 0.47
HDAC4-201ENST00000345617 IFT22Q9H7X7 185 aa17.99■□□□□ 0.47
HDAC4-201ENST00000345617 SIGLEC1Q9BZZ2 1709 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 Q6ZRG5 221 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 FAM3DQ96BQ1 224 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 NEURL3Q96EH8 262 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 ALG12Q9BV10 488 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 APOBEC3BQ9UH17 382 aaKnown RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 TAF1P21675 1872 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 GABRR3A8MPY1 467 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 GALR3O60755 368 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 HIST1H1TP22492 207 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 PTAFRP25105 342 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 CDK5Q00535 292 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 VN1R3Q9BXE9 311 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 ACKR3P25106 362 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 IDUAP35475 653 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 RPS19P39019 145 aaKnown RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 KIAA2026Q5HYC2 2103 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 THAP3Q8WTV1 239 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 PIGQQ9BRB3 760 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 ALOXE3Q9BYJ1 711 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 A4GALTQ9NPC4 353 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 ACAD8Q9UKU7 415 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 JUNDP17535 347 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 Q6ZTK2 550 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 CLEC1AQ8NC01 280 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 CPEB1Q9BZB8 566 aaKnown RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 WNK2Q9Y3S1 2297 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 NPIPB15A6NHN6 443 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 DVL1O14640 695 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 F2P00734 622 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 ZNF140P52738 457 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 DVL1P1P54792 670 aaPredicted RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 UBE2G1P62253 170 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 SLC38A6Q8IZM9 456 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 OR1J1Q8NGS3 322 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 TECTBQ96PL2 329 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 H3BML4 177 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 PSMB10P40306 273 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 PM20D1Q6GTS8 502 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 RTL10Q7L3V2 364 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 MYOFQ9NZM1 2061 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 CD53P19397 219 aa17.98■□□□□ 0.47
HDAC4-201ENST00000345617 RPS25P62851 125 aaKnown RBP17.98■□□□□ 0.47
HDAC4-201ENST00000345617 OR7A5Q15622 319 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms