RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 ACVR1BP36896 505 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 MLLT10P55197 1068 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TEKQ02763 1124 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TOP3AQ13472 1001 aaPredicted RBP12.1□□□□□ -0.47
PRPF18-201ENST00000320054 MED21Q13503 144 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 MAD2L1BPQ15013 274 aaPredicted RBP12.1□□□□□ -0.47
PRPF18-201ENST00000320054 MESTQ5EB52 335 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 SLC25A30Q5SVS4 291 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 SLC35F1Q5T1Q4 408 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 EEF1A1P5Q5VTE0 462 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 OR2A2Q6IF42 318 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 PTCHD4Q6ZW05 846 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 P4HA3Q7Z4N8 544 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 THAP5Q7Z6K1 395 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 CD163Q86VB7 1156 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 ENTHD1Q8IYW4 607 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 MARVELD2Q8N4S9 558 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 FAM26EQ8N5C1 309 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TCEANCQ8N8B7 351 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 OR52E2Q8NGJ4 325 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 OR6X1Q8NH79 312 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 RHOXF1Q8NHV9 184 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TMEM163Q8TC26 289 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 FBLIM1Q8WUP2 373 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TMEM45BQ96B21 275 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 RASD2Q96D21 266 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TXNDC15Q96J42 360 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 DDOQ99489 341 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TM9SF2Q99805 663 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 TP63Q9H3D4 680 aaPredicted RBP12.1□□□□□ -0.47
PRPF18-201ENST00000320054 MED29Q9NX70 200 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 RNF6Q9Y252 685 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 CFAP46Q8IYW2 2715 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 INTS1Q8N201 2190 aaKnown RBP12.1□□□□□ -0.47
PRPF18-201ENST00000320054 KALRNO60229 2985 aa12.1□□□□□ -0.47
PRPF18-201ENST00000320054 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 MBD3L4A6NDZ8 208 aaPredicted RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 MBD3L3A6NE82 208 aaPredicted RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 MBD3L5A6NJ08 208 aaPredicted RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 XKRYO14609 159 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 SLC2A10O95528 541 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 YES1P07947 543 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 ZNF3P17036 446 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 CDKN2AP42771 156 aaKnown RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 BIDP55957 195 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 CLDN17P56750 224 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 IL5RAQ01344 420 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 CD47Q08722 323 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 MELKQ14680 651 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 OCLNQ16625 522 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 TMEM201Q5SNT2 666 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 RTL6Q6ICC9 239 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 RPTNQ6XPR3 784 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 JAZF1Q86VZ6 243 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 DOLPP1Q86YN1 238 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 MCEMP1Q8IX19 187 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 SLC37A3Q8NCC5 494 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 NPEPL1Q8NDH3 523 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 OR4K13Q8NH42 304 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 MBD3L2Q8NHZ7 208 aaPredicted RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 UBE2FQ969M7 185 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 SLC25A44Q96H78 314 aaPredicted RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 GMPPAQ96IJ6 420 aaPredicted RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 CNBD2Q96M20 576 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 ZNF385AQ96PM9 386 aaKnown RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 KCNK17Q96T54 332 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 ALG12Q9BV10 488 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 MRPL13Q9BYD1 178 aaKnown RBP12.09□□□□□ -0.47
PRPF18-201ENST00000320054 PARPBPQ9NWS1 579 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 LRCH1Q9Y2L9 728 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 FAM215AQ9Y5M1 114 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 ZFYVE26Q68DK2 2539 aa12.09□□□□□ -0.47
PRPF18-201ENST00000320054 POLEQ07864 2286 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 PRSS37A4D1T9 235 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 SLC35F4A4IF30 521 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 ZNF726A6NNF4 738 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 KDM4EB2RXH2 506 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 PRR23D1E9PI22 279 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 M0R3G1 203 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 ARHGEF9O43307 516 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 TLX2O43763 284 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 SS18L1O75177 396 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 TRMUO75648 421 aaKnown RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 ZNF432O94892 652 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 RENP00797 406 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 PRR23D2P0DMB1 279 aaPredicted RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 PAICSP22234 425 aaKnown RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 TIMP3P35625 211 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 SLC25A1P53007 311 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 ITGADQ13349 1161 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 CRMP1Q14194 572 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 GUSBP1Q15486 140 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 EIF2S3LQ2VIR3 472 aaKnown RBP12.08□□□□□ -0.48
PRPF18-201ENST00000320054 MEDAGQ5VYS4 303 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 PLXDC2Q6UX71 529 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 TMEM123Q8N131 208 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 SDR9C7Q8NEX9 313 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 FNDC8Q8TC99 324 aa12.08□□□□□ -0.48
PRPF18-201ENST00000320054 ZNF566Q969W8 418 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms