RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 NCOA6Q14686 2063 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 J3QR89 54 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 CDK2AP1O14519 115 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 CBLP22681 906 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ELAVL1Q15717 326 aaKnown RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 GFOD2Q3B7J2 385 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 FAM74A3Q4VXF1 159 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 PAPD4Q6PIY7 484 aaKnown RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 GPR152Q8TDT2 470 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 MMABQ96EY8 250 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 TMPRSS13Q9BYE2 586 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 TLCD2A6NGC4 264 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ABCD4O14678 606 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ARPC3O15145 178 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 PLPP2O43688 288 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 SMIM6P0DI80 62 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 PDHA2P29803 388 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 VN1R2Q8NFZ6 395 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ABHD14BQ96IU4 210 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 C3orf30Q96M34 536 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 MED9Q9NWA0 146 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 TP53TG5Q9Y2B4 290 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 N6AMT1Q9Y5N5 214 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 CSO75390 466 aaKnown RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 CH25HO95992 272 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 KCNJ3P48549 501 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 PRRT3Q5FWE3 981 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 HSD17B13Q7Z5P4 300 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 LAX1Q8IWV1 398 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 Q8IYB0 196 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 CLRN3Q8NCR9 226 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 OR51A7Q8NH64 312 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 SLC25A36Q96CQ1 311 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 SLC35A4Q96G79 324 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 MICU1Q9BPX6 476 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 NECAP2Q9NVZ3 263 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 BOKQ9UMX3 212 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 AGRPO00253 132 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ALDOBP05062 364 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ARNTP27540 789 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 DUSP1P28562 367 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 GLYR1Q49A26 553 aaPredicted RBP8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ABI3BPQ7Z7G0 1075 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 LGI3Q8N145 548 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 GALNT16Q8N428 558 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF680Q8NEM1 530 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 DEFB118Q96PH6 123 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 OR5B2Q96R09 309 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 RRAGCQ9HB90 399 aa8.16□□□□□ -1.1
COL6A5-202ENST00000312481 ST8SIA5O15466 376 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 CXADRP78310 365 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 DHODHQ02127 395 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 MRPL2Q5T653 305 aaKnown RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 ADGRG3Q86Y34 549 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 SLC39A11Q8N1S5 342 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 ANKRD9Q96BM1 317 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 SRRQ9GZT4 340 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 RARRES3Q9UL19 164 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 FXYD1O00168 92 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 BHLHE40O14503 412 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 PIN1Q13526 163 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 NSDHLQ15738 373 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 MARCH8Q5T0T0 291 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 C17orf99Q6UX52 265 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 DOK3Q7L591 496 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 SEMA6DQ8NFY4 1073 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 ZNF701Q9NV72 531 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 SSX5O60225 188 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 PTHLHP12272 177 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 ACVR1BP36896 505 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 HEPHL1Q6MZM0 1159 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 OR10K1Q8NGX5 313 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 METTL17Q9H7H0 456 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 PCDHGA1Q9Y5H4 931 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 SLC5A10A0PJK1 596 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 TMEM218A2RU14 115 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 DSCR3O14972 297 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 CTNSO60931 367 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 LDAHQ9H6V9 325 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 GPR55Q9Y2T6 319 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 KCNE1BA0A087WTH5 132 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 WTIPA6NIX2 430 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 IFITM5A6NNB3 132 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 PGA3P0DJD8 388 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 FCGR2AP12318 317 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 SUB1P53999 127 aaKnown RBP eCLIP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 SOX4Q06945 474 aaPredicted RBP8.15□□□□□ -1.1
COL6A5-202ENST00000312481 NFATC4Q14934 902 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 F2RL3Q96RI0 385 aa8.15□□□□□ -1.1
COL6A5-202ENST00000312481 FIGNL2A6NMB9 653 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 P04436 131 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 CD96P40200 585 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 DIO1P49895 249 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 HNF4GQ14541 408 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 MFSD12Q6NUT3 480 aa8.15□□□□□ -1.11
COL6A5-202ENST00000312481 ISLR2Q6UXK2 745 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 231.4 ms