RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OR4C11Q6IEV9 310 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ACSM5Q6NUN0 579 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RPL13AP3Q6NVV1 102 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 TNFAIP8L2Q6P589 184 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 CNIH2Q6PI25 160 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 BAIAP2L2Q6UXY1 529 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 WASH2PQ6VEQ5 465 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 HDDC2Q7Z4H3 204 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 LRRC28Q86X40 367 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 PPP1R3BQ86XI6 285 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 TRAPPC5Q8IUR0 188 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 GID4Q8IVV7 300 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SAMD14Q8IZD0 417 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SLC43A2Q8N370 569 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 YIPF7Q8N8F6 280 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF740Q8NDX6 193 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 OR4D11Q8NGI4 311 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 OR52P1PQ8NH57 321 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 OR5K2Q8NHB8 316 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 THAP4Q8WY91 577 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 PNPLA2Q96AD5 504 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF501Q96CX3 271 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RADILQ96JH8 1075 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 CMTM3Q96MX0 182 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 AMDHD1Q96NU7 426 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 F2RL3Q96RI0 385 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SMAD5Q99717 465 aaKnown RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ATF6BQ99941 703 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 TIMM29Q9BSF4 260 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SARGQ9BW04 601 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RAB11FIP5Q9BXF6 653 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RSPO3Q9BXY4 272 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RAB33BQ9H082 229 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 MMP28Q9H239 520 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SPNS1Q9H2V7 528 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 OR51I1Q9H343 314 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 GLIPR2Q9H4G4 154 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SERHL2Q9H4I8 314 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RANBP3Q9H6Z4 567 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 MVB12BQ9H7P6 319 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 RANGRFQ9HD47 186 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 EMC7Q9NPA0 242 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 KRCC1Q9NPI7 259 aaPredicted RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SLC35C2Q9NQQ7 365 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 CYSLTR2Q9NS75 346 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 FGF21Q9NSA1 209 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 GIMAP4Q9NUV9 329 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 KLHL28Q9NXS3 571 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 B3GNT2Q9NY97 397 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 IL20Q9NYY1 176 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 COPZ2Q9P299 210 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 NUFIP1Q9UHK0 495 aaKnown RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ACSL5Q9ULC5 683 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SH2B3Q9UQQ2 575 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ALG5Q9Y673 324 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 CDH10Q9Y6N8 788 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 FLNAP21333 2647 aaKnown RBP4.44□□□□□ -1.7
CKS1B-201ENST00000308987 HCFC1P51610 2035 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 SCN3AQ9NY46 2000 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ZANQ9Y493 2812 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF407Q9C0G0 2248 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 EML6Q6ZMW3 1958 aa4.44□□□□□ -1.7
CKS1B-201ENST00000308987 PRRC2AP48634 2157 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 A0A0B4J293 547 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 C7orf66A4D0T2 115 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 OR5K3A6NET4 321 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 DUXAA6NLW8 204 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 FAM227AF5H4B4 570 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 INMT-MINDY4F8WBC2 141 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 H3BMH7 237 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 J3QRE1 110 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 WWP2O00308 870 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 SAP18O00422 153 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 GABRPO00591 440 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 TFECO14948 347 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 SURF4O15260 269 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 B3GALT2O43825 422 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 KLF7O75840 302 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 SOX30O94993 753 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 DHFRP00374 187 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 CD1AP06126 327 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 IGFBP1P08833 259 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ARSBP15848 533 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 CSNK2A2P19784 350 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 AZGP1P25311 298 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PBLDP30039 288 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 SLC6A1P30531 599 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 AHRP35869 848 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 TALDO1P37837 337 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 OMPP47874 163 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 INPP1P49441 399 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 CASP9P55211 416 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 CDH11P55287 796 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 P2RX3P56373 397 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ABATP80404 500 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 MXD1Q05195 221 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PRDX1Q06830 199 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 DMPKQ09013 629 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF155Q12901 538 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 MRPL28Q13084 256 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms