RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 SLC22A6Q4U2R8 563 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 KHDC1Q4VXA5 237 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 GCNT2Q8N0V5 402 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 ZFP82Q8N141 532 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 B3GNT7Q8NFL0 401 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 CLMPQ9H6B4 373 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 MBD1Q9UIS9 605 aaPredicted RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 ASB4Q9Y574 426 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SMIM30A4D0T7 59 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 G3V2L1 256 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 METTL15P1P0C7V9 234 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 CTGFP29279 349 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 GGT5P36269 586 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 RPL13AP40429 203 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 RELAQ04206 551 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 PEA15Q15121 130 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 METTL11BQ5VVY1 283 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SLC22A25Q6T423 547 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 FBXW12Q6X9E4 464 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 ZNF454Q8N9F8 522 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 OR5D16Q8NGK9 328 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 HAS2Q92819 552 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SAT2Q96F10 170 aaPredicted RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SGPP1Q9BX95 441 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 AADACL3Q5VUY0 350 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 CST9LP1Q5W188 147 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 GDPD3Q7L5L3 318 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 KRTCAP2Q8N6L1 136 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SCCPDHQ8NBX0 429 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 ST8SIA1Q92185 356 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 VN1R3Q9BXE9 311 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SLC6A20Q9NP91 592 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 GFYI3L273 518 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 FUT1P19526 365 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 NR4A2P43354 598 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SNTB1Q13884 538 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 HNF4GQ14541 408 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 TRIP6Q15654 476 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 AAED1Q7RTV5 226 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SUMF2Q8NBJ7 301 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 ZNF566Q969W8 418 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 NDFIP1Q9BT67 221 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 RIMS3Q9UJD0 308 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 LRIT2A6NDA9 550 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 GOSR2O14653 212 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 UBCP0CG48 685 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 TPT1P13693 172 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 CYP4V2Q6ZWL3 525 aaPredicted RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 NRMQ8IXM6 262 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 OR52R1Q8NGF1 315 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 MKRN2Q9H000 416 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SOX17Q9H6I2 414 aaPredicted RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 ASIC5Q9NY37 505 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 DENRO43583 198 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 TRAF3IP2O43734 574 aaPredicted RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SGSHP51688 502 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SUMO3P55854 103 aaPredicted RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 CSNK1G2P78368 415 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 RGNQ15493 299 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 TBRG1Q3YBR2 411 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 SPARTQ8N0X7 666 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 ITFG2Q969R8 447 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 NSUN5Q96P11 429 aaKnown RBP7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 POMT2Q9UKY4 750 aa7.7□□□□□ -1.18
PCDHB1-201ENST00000306549 PRAMEF25A6NGN4 478 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 LGALS8O00214 317 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 MSTNO14793 375 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 LAMP1P11279 417 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 PTPN6P29350 595 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 NDUFAF7Q7L592 441 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 TERB2Q8NHR7 220 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 BCL7BQ9BQE9 202 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 VSX1Q9NZR4 365 aaPredicted RBP7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 KIAA1671Q9BY89 1806 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 CSO75390 466 aaKnown RBP7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 NXPH2O95156 264 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 RASAL1O95294 804 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 AIFM1O95831 613 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 GP1BAP07359 652 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 TRHRP34981 398 aaPredicted RBP7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 RGRP47804 291 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 CAMK2BQ13554 666 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 SSPNQ14714 243 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 HEPHL1Q6MZM0 1159 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 ABHD17CQ6PCB6 329 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 FAM199XQ6PEV8 388 aaPredicted RBP7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 TSSK4Q6SA08 328 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 PRR22Q8IZ63 422 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 C1QTNF3Q9BXJ4 246 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 CACNG6Q9BXT2 260 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 LIN7BQ9HAP6 207 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 FGF22Q9HCT0 170 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 IL7P13232 177 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 SDC1P18827 310 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 SIRPAP78324 504 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 CRMP1Q14194 572 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 APIPQ96GX9 242 aa7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 DCLRE1CQ96SD1 692 aaKnown RBP7.69□□□□□ -1.18
PCDHB1-201ENST00000306549 TBC1D29Q9UFV1 150 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms