RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FGGYQ96C11 551 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SLC6A18Q96N87 628 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SLC19A3Q9BZV2 496 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ATP13A2Q9NQ11 1180 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 MBNL1Q9NR56 388 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 TRAPPC2LQ9UL33 140 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 BOLA1Q9Y3E2 137 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 LPLP06858 475 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ICAM2P13598 275 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 CTU2Q2VPK5 515 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 PAPD4Q6PIY7 484 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 OR10K1Q8NGX5 313 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SGPP1Q9BX95 441 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 PRMT8Q9NR22 394 aaPredicted RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 FGF21Q9NSA1 209 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 GLCEO94923 617 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ABOP16442 354 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ACSM1Q08AH1 577 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 DUSP5Q16690 384 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SECTM1Q8WVN6 248 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 RBMXL1Q96E39 390 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 TRABD2BA6NFA1 517 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ZNF93P35789 620 aaPredicted RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 LTC4SQ16873 150 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SLC35D3Q5M8T2 416 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 CMIPQ8IY22 773 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 OR13H1Q8NG92 308 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SLC35B4Q969S0 331 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 MSI2Q96DH6 328 aaKnown RBP12.85□□□□□ -0.35
PRKCB-201ENST00000303531 C1QTNF3Q9BXJ4 246 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 KIR3DX1Q9H7L2 352 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 SDHAF2Q9NX18 166 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 MMACHCQ9Y4U1 282 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 ASB1Q9Y576 335 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 CORINQ9Y5Q5 1042 aa12.85□□□□□ -0.35
PRKCB-201ENST00000303531 LGI1O95970 557 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 CD46P15529 392 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 DPP4P27487 766 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 GRAMD2AQ8IUY3 354 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 OCSTAMPQ9BR26 566 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 RNF167Q9H6Y7 350 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 NOSIPQ9Y314 301 aaKnown RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 LOC100289279A0A1B0GTE1 492 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 FUCA1P04066 466 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 M6PRP20645 277 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 ETV1P50549 477 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 PPT1P50897 306 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 GABREP78334 506 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 BATFQ16520 125 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 LIN37Q96GY3 246 aaPredicted RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 TLCD2A6NGC4 264 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 PMP2P02689 132 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 TGM4P49221 684 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SRP9P49458 86 aaKnown RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SLC35A2P78381 396 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SLC22A25Q6T423 547 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 VN1R2Q8NFZ6 395 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 STACQ99469 402 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 HMGN4O00479 90 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 TRHRP34981 398 aaPredicted RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 MS4A6EQ96DS6 147 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 PDCD1LG2Q9BQ51 273 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 GPR55Q9Y2T6 319 aaPredicted RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 RNF212BA8MTL3 300 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 TRMT12Q53H54 448 aaKnown RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 OR52W1Q6IF63 320 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 ADGRE4PQ86SQ3 457 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SLC25A46Q96AG3 418 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 Q96M85 177 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 EMC7Q9NPA0 242 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.352e-7■■■■■ 28.8
PRKCB-201ENST00000303531 FAM212BQ9NTI7 297 aaPredicted RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SH3BGRL2Q9UJC5 107 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 OR52A1Q9UKL2 312 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 RPS10-NUDT3A0A1W2PQS6 291 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 GFYI3L273 518 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 NAGAP17050 411 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 RPS10P46783 165 aaKnown RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 FAPQ12884 760 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 AFMIDQ63HM1 303 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 RSPO2Q6UXX9 243 aaPredicted RBP12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SYT9Q86SS6 491 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SLC25A37Q9NYZ2 338 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 SLC23A2Q9UGH3 650 aa12.84□□□□□ -0.35
PRKCB-201ENST00000303531 A8MVM7 634 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 TXNL1O43396 289 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 TAS2R30P59541 319 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 DCAF12Q5T6F0 453 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 HEPHL1Q6MZM0 1159 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 SLC43A2Q8N370 569 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 SPPL3Q8TCT6 385 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 LINC01599Q8WXQ3 324 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 PHYHIPQ92561 330 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.83□□□□□ -0.35
PRKCB-201ENST00000303531 A3GALT2U3KPV4 340 aa12.83□□□□□ -0.35
PRKCB-201ENST00000303531 PRSS45Q7RTY3 260 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 DCXRQ7Z4W1 244 aa12.83□□□□□ -0.36
PRKCB-201ENST00000303531 DCLRE1CQ96SD1 692 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms