RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 NR4A1P22736 598 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 CHN2P52757 468 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 AQP5P55064 265 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 CDH12P55289 794 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 PUDPQ08623 228 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 CAMK2DQ13557 499 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 CR1LQ2VPA4 569 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 NHLRC1Q6VVB1 395 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 RANBP3LQ86VV4 465 aaPredicted RBP16.93■□□□□ 0.3
CXCL3-201ENST00000296026 ARMC8Q8IUR7 673 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 WDFY1Q8IWB7 410 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 OR6N1Q8NGY5 312 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 LRRC8CQ8TDW0 803 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 UBASH3BQ8TF42 649 aa16.93■□□□□ 0.3
CXCL3-201ENST00000296026 MRPL39Q9NYK5 338 aaKnown RBP16.93■□□□□ 0.3
CXCL3-201ENST00000296026 SERPINI2O75830 405 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 B4GALT1P15291 398 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 AHCYP23526 432 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 IL2RGP31785 369 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 AGKQ53H12 422 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 BEND6Q5SZJ8 279 aaPredicted RBP16.92■□□□□ 0.3
CXCL3-201ENST00000296026 ZNF627Q7L945 461 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 HIPK4Q8NE63 616 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 ZNF75AQ96N20 296 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 TMEM43Q9BTV4 400 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 C19orf24Q9BVV8 132 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 ULBP2Q9BZM5 246 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 TPK1Q9H3S4 243 aa16.92■□□□□ 0.3
CXCL3-201ENST00000296026 PLPP3O14495 311 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 MFN2O95140 757 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 ZNF35P13682 527 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 IFNGR1P15260 489 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 ZNF14P17017 642 aaPredicted RBP16.91■□□□□ 0.3
CXCL3-201ENST00000296026 APEX1P27695 318 aaKnown RBP16.91■□□□□ 0.3
CXCL3-201ENST00000296026 PTDSS1P48651 473 aaKnown RBP16.91■□□□□ 0.3
CXCL3-201ENST00000296026 RIN1Q13671 783 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 SQLEQ14534 574 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 MSMPQ1L6U9 139 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 TRMT5Q32P41 509 aaKnown RBP16.91■□□□□ 0.3
CXCL3-201ENST00000296026 SWT1Q5T5J6 900 aaKnown RBP16.91■□□□□ 0.3
CXCL3-201ENST00000296026 AGBL2Q5U5Z8 902 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 PXKQ7Z7A4 578 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 SNX32Q86XE0 403 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 SMYD1Q8NB12 490 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 HPS1Q92902 700 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 MRPL24Q96A35 216 aaKnown RBP16.91■□□□□ 0.3
CXCL3-201ENST00000296026 SNX18Q96RF0 628 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 MCHR1Q99705 422 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 FOXB1Q99853 325 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 MRPL37Q9BZE1 423 aaKnown RBP16.91■□□□□ 0.3
CXCL3-201ENST00000296026 EVA1AQ9H8M9 152 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 ZNF224Q9NZL3 707 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 ANGPT4Q9Y264 503 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 SPEF1Q9Y4P9 236 aa16.91■□□□□ 0.3
CXCL3-201ENST00000296026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.9■□□□□ 0.3
CXCL3-201ENST00000296026 LYNX1G3V0Z9 82 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 M0R3H8 397 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 SYNGR3O43761 229 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 MT-ATP6P00846 226 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 LYNX1P0DP58 116 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 GIPRP48546 466 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 ATP4BP51164 291 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 TRIP10Q15642 601 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 DLEU7Q6UYE1 221 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 OR5J2Q8NH18 312 aa16.9■□□□□ 0.3
CXCL3-201ENST00000296026 CPPED1Q9BRF8 314 aaPredicted RBP16.9■□□□□ 0.3
CXCL3-201ENST00000296026 C11orf98E9PRG8 122 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 M0R233 179 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 RAB36O95755 333 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 ADORA3P0DMS8 318 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 GLRXP35754 106 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 CSNK1A1P48729 337 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 EVX1P49640 407 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 BIDP55957 195 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 RAB1AP62820 205 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 DUSP7Q16829 419 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 RUNDC3AQ59EK9 446 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 ZNF613Q6PF04 617 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 LINC00114Q6XXX2 140 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 PTOV1Q86YD1 416 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 LINC01356Q8N9X3 169 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 ARHGDIGQ99819 225 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 MS4A5Q9H3V2 200 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 DENND2DQ9H6A0 471 aaPredicted RBP16.89■□□□□ 0.29
CXCL3-201ENST00000296026 REV1Q9UBZ9 1251 aa16.89■□□□□ 0.29
CXCL3-201ENST00000296026 TMEFF2Q9UIK5 374 aaPredicted RBP16.89■□□□□ 0.29
CXCL3-201ENST00000296026 CHP2O43745 196 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 FMO6PO60774 539 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 UBL3O95164 117 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 OR6A2O95222 327 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 OPN1SWP03999 348 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 PCBP3P57721 371 aaKnown RBP16.88■□□□□ 0.29
CXCL3-201ENST00000296026 GALK2Q01415 458 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 GKAP1Q5VSY0 366 aaPredicted RBP16.88■□□□□ 0.29
CXCL3-201ENST00000296026 C11orf65Q8NCR3 313 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 SYT3Q9BQG1 590 aa16.88■□□□□ 0.29
CXCL3-201ENST00000296026 CPSF4LA6NMK7 179 aaKnown RBP16.87■□□□□ 0.29
CXCL3-201ENST00000296026 M0QX08 132 aa16.87■□□□□ 0.29
CXCL3-201ENST00000296026 C8BP07358 591 aa16.87■□□□□ 0.29
CXCL3-201ENST00000296026 TCN1P20061 433 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms