RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 GRINAQ7Z429 371 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 VTCN1Q7Z7D3 282 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 PRIMA1Q86XR5 153 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 SLC43A2Q8N370 569 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 ZNF611Q8N823 705 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 SLC38A5Q8WUX1 472 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 GEMIN6Q8WXD5 167 aaKnown RBP6.9□□□□□ -1.3
PNKP-229ENST00000637897 C7orf34Q96L11 122 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 ZNF607Q96SK3 696 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 EPYCQ99645 322 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 TRIM2Q9C040 744 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 HHATLQ9HCP6 504 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 EXD2Q9NVH0 621 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 P2RX2Q9UBL9 471 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 SLC35A3Q9Y2D2 325 aa6.9□□□□□ -1.3
PNKP-229ENST00000637897 MAGED1Q9Y5V3 778 aaPredicted RBP6.9□□□□□ -1.3
PNKP-229ENST00000637897 YLPM1P49750 1951 aaKnown RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 ARFGEF3Q5TH69 2177 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 HIVEP2P31629 2446 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 A0A087WXM4 84 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 A0A096LNT2 108 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TMED7-TICAM2A0A0A6YYA0 188 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SMIM31A0A1B0GVY4 71 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 A0A1W2PR80 420 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 CDHR4A6H8M9 788 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 GJE1A6NN92 205 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 hCG_2039718K7EN88 272 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 M0QX08 132 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SULT2B1O00204 365 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 FRS3O43559 492 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TPST2O60704 377 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SMPD2O60906 423 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 FZD7O75084 574 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SERPINB7O75635 380 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 GNAO1P09471 354 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SMIM18P0DKX4 95 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 PTNP21246 168 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 IGFBP5P24593 272 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 APOBEC1P41238 236 aaKnown RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 CRYBA2P53672 197 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TUBA4AP68366 448 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 HOXC5Q00444 222 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 EGR4Q05215 589 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 BSPH1Q075Z2 132 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 LGALS3BPQ08380 585 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 APOFQ13790 326 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SLC17A1Q14916 467 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 P2RY6Q15077 328 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 PRAMEF8Q5VWM4 474 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 PRAMEF7Q5VXH5 474 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 GTF2IRD2BQ6EKJ0 949 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 ALKBH2Q6NS38 261 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 BIVMQ86UB2 503 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 GTF2IRD2Q86UP8 949 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 KRT73Q86Y46 540 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 C8orf59Q8N0T1 100 aaPredicted RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 TMEM99Q8N816 258 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 MAPK1IP1LQ8NDC0 245 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 STEAP2Q8NFT2 490 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TSPAN14Q8NG11 270 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 OIT3Q8WWZ8 545 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 PIGTQ969N2 578 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TAMM41Q96BW9 452 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TMEM19Q96HH6 336 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 ZNF385AQ96PM9 386 aaKnown RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 PTDSS2Q9BVG9 487 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SPATA5L1Q9BVQ7 753 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 PRR14Q9BWN1 585 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 AMBRA1Q9C0C7 1298 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TOR3AQ9H497 397 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 MTHFD2LQ9H903 347 aaPredicted RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 SMURF2Q9HAU4 748 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 FAM118AQ9NWS6 357 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 KLHL9Q9P2J3 617 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SEC14L4Q9UDX3 406 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 TMED7Q9Y3B3 224 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SAMHD1Q9Y3Z3 626 aaKnown RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 FAM32AQ9Y421 112 aaKnown RBP6.89□□□□□ -1.31
PNKP-229ENST00000637897 FLVCR1Q9Y5Y0 555 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 SLC25A15Q9Y619 301 aa6.89□□□□□ -1.31
PNKP-229ENST00000637897 HEATR1Q9H583 2144 aaKnown RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 IGKV1D-42A0A075B6H8 117 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 LIPT2A6NK58 231 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 OR5H1A6NKK0 313 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 FTCDNL1E5RQL4 147 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 E7EQL1 145 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 SLC16A6O15403 523 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 ZNF208O43345 1280 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 CNOT4O95628 575 aaKnown RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 AGR2O95994 175 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 IGHV4-39P01824 125 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 BCHEP06276 602 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 HEXAP06865 529 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 PABPC4LP0CB38 370 aaKnown RBP6.88□□□□□ -1.31
PNKP-229ENST00000637897 NR2F1P10589 423 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 RHCEP18577 417 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 HTR2AP28223 471 aa6.88□□□□□ -1.31
PNKP-229ENST00000637897 CDKN1AP38936 164 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms