RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 IDH3GP51553 393 aaPredicted RBP15.6■□□□□ 0.09
PNKP-225ENST00000636214 CDH12P55289 794 aa15.6■□□□□ 0.09
PNKP-225ENST00000636214 CARTPTQ16568 116 aa15.6■□□□□ 0.09
PNKP-225ENST00000636214 FAM169BQ8N8A8 192 aa15.6■□□□□ 0.09
PNKP-225ENST00000636214 OR6N1Q8NGY5 312 aa15.6■□□□□ 0.09
PNKP-225ENST00000636214 NANOS1Q8WY41 292 aaKnown RBP15.6■□□□□ 0.09
PNKP-225ENST00000636214 TNFRSF13CQ96RJ3 184 aa15.6■□□□□ 0.09
PNKP-225ENST00000636214 VRK1Q99986 396 aaPredicted RBP15.6■□□□□ 0.09
PNKP-225ENST00000636214 MRGBPQ9NV56 204 aa15.6■□□□□ 0.09
PNKP-225ENST00000636214 CRNNQ9UBG3 495 aaPredicted RBP15.6■□□□□ 0.09
PNKP-225ENST00000636214 POFUT2Q9Y2G5 429 aa15.6■□□□□ 0.09
PNKP-225ENST00000636214 CPSF4LA6NMK7 179 aaKnown RBP15.59■□□□□ 0.09
PNKP-225ENST00000636214 KIAA1324LA8MWY0 1029 aaPredicted RBP15.59■□□□□ 0.09
PNKP-225ENST00000636214 M0QX08 132 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 CHP2O43745 196 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 EDF1O60869 148 aaKnown RBP15.59■□□□□ 0.09
PNKP-225ENST00000636214 F12P00748 615 aaPredicted RBP15.59■□□□□ 0.09
PNKP-225ENST00000636214 IFNA2P01563 188 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 BGLAPP02818 100 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 CBR1P16152 277 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 LOXL1Q08397 574 aaPredicted RBP15.59■□□□□ 0.09
PNKP-225ENST00000636214 TMEM249Q2WGJ8 235 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 PTOV1Q86YD1 416 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 IL17RDQ8NFM7 739 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 RASSF5Q8WWW0 418 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 PROX1Q92786 737 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 SLC41A3Q96GZ6 507 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 ARHGDIGQ99819 225 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 PIMREGQ9BSJ6 248 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 EMC6Q9BV81 110 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 ULBP2Q9BZM5 246 aa15.59■□□□□ 0.09
PNKP-225ENST00000636214 MYOZ1Q9NP98 299 aaPredicted RBP15.59■□□□□ 0.09
PNKP-225ENST00000636214 MRPL39Q9NYK5 338 aaKnown RBP15.59■□□□□ 0.09
PNKP-225ENST00000636214 SLC35F4A4IF30 521 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 MS4A18H0YCH9 400 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 IGKV3-15P01624 115 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 IGLV1-44P01699 117 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 OR4A8P0C604 315 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 ADORA3P0DMS8 318 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 TROVE2P10155 538 aaKnown RBP eCLIP15.58■□□□□ 0.08
PNKP-225ENST00000636214 CD79AP11912 226 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 USF1P22415 310 aaPredicted RBP15.58■□□□□ 0.08
PNKP-225ENST00000636214 PCGF2P35227 344 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 PCBP3P57721 371 aaKnown RBP15.58■□□□□ 0.08
PNKP-225ENST00000636214 CYLC2Q14093 348 aaPredicted RBP15.58■□□□□ 0.08
PNKP-225ENST00000636214 SWI5Q1ZZU3 235 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 MS4A18Q3C1V0 323 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 CHRFAM7AQ494W8 412 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 MMEL1Q495T6 779 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 METTL21CQ5VZV1 264 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 TTC33Q6PID6 262 aaPredicted RBP15.58■□□□□ 0.08
PNKP-225ENST00000636214 C20orf196Q8IYI0 205 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 TMEM123Q8N131 208 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 NUP37Q8NFH4 326 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 OR5J2Q8NH18 312 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 OR10A6Q8NH74 314 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 VANGL1Q8TAA9 524 aaPredicted RBP15.58■□□□□ 0.08
PNKP-225ENST00000636214 C10orf105Q8TEF2 133 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 LRR1Q96L50 414 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 SH3GL1Q99961 368 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 RSPO3Q9BXY4 272 aaPredicted RBP15.58■□□□□ 0.08
PNKP-225ENST00000636214 RAB1BQ9H0U4 201 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 NELFAQ9H3P2 528 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 MED29Q9NX70 200 aa15.58■□□□□ 0.08
PNKP-225ENST00000636214 C11orf98E9PRG8 122 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 NDUFS8O00217 210 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 GPRIN2O60269 458 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 ENTPD5O75356 428 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 SEC14L2O76054 403 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 HPRP00739 348 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 HIST1H2ABP04908 130 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 HLA-DOBP13765 273 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 CD247P20963 164 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 CSNK1A1P48729 337 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 CAMK2DQ13557 499 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 SELPLGQ14242 412 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 DUSP7Q16829 419 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 TRMT5Q32P41 509 aaKnown RBP15.57■□□□□ 0.08
PNKP-225ENST00000636214 ENTPD8Q5MY95 495 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 ZNF813Q6ZN06 617 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 HIST3H2AQ7L7L0 130 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 PXKQ7Z7A4 578 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 MDP1Q86V88 176 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 RETREG3Q86VR2 466 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 HIST1H2ACQ93077 130 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 MOGAT1Q96PD6 335 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 KAT8Q9H7Z6 458 aaKnown RBP15.57■□□□□ 0.08
PNKP-225ENST00000636214 DYNLRB1Q9NP97 96 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 SPEF1Q9Y4P9 236 aa15.57■□□□□ 0.08
PNKP-225ENST00000636214 COL6A5A8TX70 2615 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 IGHV2OR16-5A0A0B4J2B6 119 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 TRAPPC13A5PLN9 417 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 PLPP3O14495 311 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 TPST2O60704 377 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 LY6HO94772 140 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 CELA3BP08861 270 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 UMPSP11172 480 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 NPR2P20594 1047 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 CALCRP30988 508 aa15.56■□□□□ 0.08
PNKP-225ENST00000636214 LSP1P33241 339 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms