RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 TMEM201Q5SNT2 666 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 PDSS1Q5T2R2 415 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 UGT2A3Q6UWM9 527 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 SLC35D2Q76EJ3 337 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 FAM26EQ8N5C1 309 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 SLC37A3Q8NCC5 494 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 LSM14AQ8ND56 463 aaKnown RBP12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 ANKK1Q8NFD2 765 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 BBS1Q8NFJ9 593 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 OR5M9Q8NGP3 310 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 OR4K13Q8NH42 304 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 FNDC9Q8TBE3 224 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 ASB10Q8WXI3 467 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 PTP4A1Q93096 173 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 CPNE4Q96A23 557 aaPredicted RBP12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 WBP1Q96G27 269 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 MED20Q9H944 212 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 PNPLA3Q9NST1 481 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 MED29Q9NX70 200 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 CLCF1Q9UBD9 225 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 RASD1Q9Y272 281 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 LRCH1Q9Y2L9 728 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 GPR52Q9Y2T5 361 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 HSPE1-MOB4S4R3N1 261 aa12.66□□□□□ -0.38
PHACTR4-209ENST00000633371 INTS1Q8N201 2190 aaKnown RBP12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 OR14I1A6ND48 311 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 OR6C68A6NDL8 312 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 NPIPB13A6NJU9 1138 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 CLCA1A8K7I4 914 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 NPIPB4C9JG80 1138 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 TLX2O43763 284 aaPredicted RBP12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 SERPINI2O75830 405 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 OR6A2O95222 327 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 NOS3P29474 1203 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 SDHAP31040 664 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 SLC16A1P53985 500 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 CDC42P60953 191 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 IL5RAQ01344 420 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 POU3F1Q03052 451 aaPredicted RBP12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 ITGADQ13349 1161 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 MED21Q13503 144 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 CRMP1Q14194 572 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 PON3Q15166 354 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 SNAPC1Q16533 368 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 KRTCAP3Q53RY4 240 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 SLC25A30Q5SVS4 291 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 AADACL4Q5VUY2 407 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 TMEM225Q6GV28 225 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 ARHGAP11AQ6P4F7 1023 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 CREB3L2Q70SY1 520 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 FCRLAQ7L513 359 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 GHDCQ8N2G8 530 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 ARIH2OSQ8N7S6 290 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 CYB561A3Q8NBI2 242 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 OR9K2Q8NGE7 335 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 TMEM163Q8TC26 289 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 RNF128Q8TEB7 428 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 ABHD3Q8WU67 409 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 ZNRF4Q8WWF5 429 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 HDAC2Q92769 488 aaKnown RBP12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 SARAFQ96BY9 339 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 ZNF385AQ96PM9 386 aaKnown RBP12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 APOL4Q9BPW4 351 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 NMNAT2Q9BZQ4 307 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 Q9H521 79 aa12.65□□□□□ -0.38
PHACTR4-209ENST00000633371 NCOA6Q14686 2063 aaPredicted RBP12.65□□□□□ -0.39
PHACTR4-209ENST00000633371 IGKV3D-15A0A087WSY6 115 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 FAM183AA6NL82 134 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 ENTPD6O75354 484 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 ZNF432O94892 652 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 SFTPCP11686 197 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 FMO3P31513 532 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 ACVR1BP36896 505 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 RPS3AP61247 264 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 KRR1Q13601 381 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 OCLNQ16625 522 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 C6orf141Q5SZD1 244 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 GPR139Q6DWJ6 353 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 RTL6Q6ICC9 239 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 CASP12Q6UXS9 341 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 GPAT4Q86UL3 456 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 CPOQ8IVL8 374 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 UEVLDQ8IX04 471 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 DEPDC4Q8N2C3 294 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 SETD9Q8NE22 299 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 SDR9C7Q8NEX9 313 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 OR52E2Q8NGJ4 325 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 OR8J1Q8NGP2 316 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 TRUB1Q8WWH5 349 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 ZNF775Q96BV0 537 aaPredicted RBP12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 NMD3Q96D46 503 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 ZHX1-C8orf76Q96EF9 292 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 NMNAT3Q96T66 252 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 EMC6Q9BV81 110 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 SF3B5Q9BWJ5 86 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 FN3KQ9H479 309 aa12.64□□□□□ -0.39
PHACTR4-209ENST00000633371 TIGARQ9NQ88 270 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms