RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 SF3A3Q12874 501 aaKnown RBP eCLIP9.44□□□□□ -0.9
SSBP4-215ENST00000625926 RABL3Q5HYI8 236 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 CARD17Q5XLA6 110 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 TUBA1AQ71U36 451 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 RBM45Q8IUH3 476 aaKnown RBP9.44□□□□□ -0.9
SSBP4-215ENST00000625926 PCYOX1LQ8NBM8 494 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 MAPK1IP1LQ8NDC0 245 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 OR4D11Q8NGI4 311 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 OR5J2Q8NH18 312 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 ADAMTS16Q8TE57 1224 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 PROX1Q92786 737 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF837Q96EG3 531 aaPredicted RBP9.44□□□□□ -0.9
SSBP4-215ENST00000625926 TXNDC15Q96J42 360 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 MPP4Q96JB8 637 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 LRR1Q96L50 414 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 EMC6Q9BV81 110 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 REPIN1Q9BWE0 567 aaKnown RBP9.44□□□□□ -0.9
SSBP4-215ENST00000625926 NELFAQ9H3P2 528 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 B3GAT2Q9NPZ5 323 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 SAR1AQ9NR31 198 aa9.44□□□□□ -0.9
SSBP4-215ENST00000625926 NUP214P35658 2090 aaPredicted RBP9.44□□□□□ -0.9
SSBP4-215ENST00000625926 VSTM5A8MXK1 200 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF99A8MXY4 864 aaPredicted RBP9.43□□□□□ -0.9
SSBP4-215ENST00000625926 INAFM1C9JVW0 142 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 FXYD1O00168 92 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 MRASO14807 208 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 LYPD3O95274 346 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 CH25HO95992 272 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 IFNA14P01570 189 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 IGKV3-15P01624 115 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 IGLV1-44P01699 117 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 THY1P04216 161 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 TP53P04637 393 aaPredicted RBP9.43□□□□□ -0.9
SSBP4-215ENST00000625926 CECR9P0C854 216 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 ADORA3P0DMS8 318 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 ARR3P36575 388 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 SERPINF1P36955 418 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 CAPZA2P47755 286 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 NAAAQ02083 359 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 GUCY1A3Q02108 690 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF74Q16587 644 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 SWI5Q1ZZU3 235 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 MST1LQ2TV78 715 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 HSP90B2PQ58FF3 399 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 PHYHD1Q5SRE7 291 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 REP15Q6BDI9 236 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 CGB2Q6NT52 195 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 ERICH5Q6P6B1 374 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 CLEC2AQ6UVW9 174 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 NHLRC1Q6VVB1 395 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 SNX32Q86XE0 403 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 CALHM3Q86XJ0 350 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 OR10H5Q8NGA6 315 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 OR4F15Q8NGB8 312 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 OR6N1Q8NGY5 312 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 HTRA1Q92743 480 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 FBXO17Q96EF6 278 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 SLC19A3Q9BZV2 496 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 PCDHAC1Q9H158 963 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 NANSQ9NR45 359 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 CA10Q9NS85 328 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF446Q9NWS9 450 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 GID8Q9NWU2 228 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 MED29Q9NX70 200 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 BAG5Q9UL15 447 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 SLC7A7Q9UM01 511 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 POFUT2Q9Y2G5 429 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 SH3GLB1Q9Y371 365 aa9.43□□□□□ -0.9
SSBP4-215ENST00000625926 B9A039 149 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 C11orf98E9PRG8 122 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 KPNA4O00629 521 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-215ENST00000625926 SERPINI2O75830 405 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 F12P00748 615 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-215ENST00000625926 HIST1H2ABP04908 130 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 IFNGR1P15260 489 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 IDH3GP51553 393 aaPredicted RBP9.42□□□□□ -0.9
SSBP4-215ENST00000625926 EFNA4P52798 201 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 CRYBA2P53672 197 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 SNRPD2P62316 118 aaKnown RBP9.42□□□□□ -0.9
SSBP4-215ENST00000625926 ZP4Q12836 540 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 CAMK2DQ13557 499 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 WDR88Q6ZMY6 472 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 HIST3H2AQ7L7L0 130 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 IL17RDQ8NFM7 739 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 C10orf82Q8WW14 230 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 HIST1H2ACQ93077 130 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF583Q96ND8 569 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF426Q9BUY5 554 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 ULBP2Q9BZM5 246 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 CCDC134Q9H6E4 229 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 TAS2R5Q9NYW4 299 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 ZNF229Q9UJW7 825 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 USP22Q9UPT9 525 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 CAPN7Q9Y6W3 813 aa9.42□□□□□ -0.9
SSBP4-215ENST00000625926 FN1P02751 2386 aaKnown RBP9.42□□□□□ -0.9
SSBP4-215ENST00000625926 RAI1Q7Z5J4 1906 aaPredicted RBP9.41□□□□□ -0.9
SSBP4-215ENST00000625926 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
SSBP4-215ENST00000625926 IGHV4-30-2A0A087WSY4 118 aa9.41□□□□□ -0.9
SSBP4-215ENST00000625926 SLC22A2O15244 555 aa9.41□□□□□ -0.9
SSBP4-215ENST00000625926 RNF13O43567 381 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms