RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 GXYLT2A0PJZ3 443 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 OR2F2O95006 317 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 CENPAP49450 140 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 OR2F1Q13607 317 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 EXOSC6Q5RKV6 272 aaKnown RBP13.9□□□□□ -0.18
PMS1-221ENST00000624204 C11orf87Q6NUJ2 197 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 FIGNL1Q6PIW4 674 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 TMEM150AQ86TG1 271 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 OR1J2Q8NGS2 313 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 CCDC107Q8WV48 283 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 ZNF281Q9Y2X9 895 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 AK4P27144 223 aaPredicted RBP13.9□□□□□ -0.18
PMS1-221ENST00000624204 C9orf152Q5JTZ5 239 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 DND1Q8IYX4 353 aaKnown RBP13.9□□□□□ -0.18
PMS1-221ENST00000624204 C14orf79Q96F83 325 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 ZC3H10Q96K80 434 aaKnown RBP13.9□□□□□ -0.18
PMS1-221ENST00000624204 HRH4Q9H3N8 390 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 PCOLCE2Q9UKZ9 415 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 TNFSF18Q9UNG2 199 aa13.9□□□□□ -0.18
PMS1-221ENST00000624204 CTNSO60931 367 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 RNGTTO60942 597 aaKnown RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 AIFM1O95831 613 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 OR2T7P0C7T2 308 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 SLC2A5P22732 501 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 CD34P28906 385 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 GPR1P46091 355 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 PNLIPRP2P54317 469 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 NANOS3P60323 173 aaKnown RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 FABP9Q0Z7S8 132 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 POU4F2Q12837 409 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 IRF5Q13568 498 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 HABP2Q14520 560 aaPredicted RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 STEAP1BQ6NZ63 245 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 TMEM64Q6YI46 380 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 OR51D1Q8NGF3 324 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 OR2T27Q8NH04 317 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 TMED6Q8WW62 240 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 C20orf24Q9BUV8 137 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 TRBV23OR9-2A0A075B6M9 112 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 HTR3BO95264 441 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 NDUFS1P28331 727 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 MNDAP41218 407 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 SLC8B1Q6J4K2 584 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 ENPP7Q6UWV6 458 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 USP53Q70EK8 1073 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 RHOUQ7L0Q8 258 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 TAS2R8Q9NYW2 309 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 IKZF2Q9UKS7 526 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 A0A0A6YYD5 115 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 RNF222A6NCQ9 220 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 ZNF860A6NHJ4 632 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 GRM6O15303 877 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 HIST1H1CP16403 213 aaKnown RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 S100PP25815 95 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 PRKXP51817 358 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 ZNF136P52737 540 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 EFNB2P52799 333 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 HTRA4P83105 476 aaPredicted RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 CAP1Q01518 475 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 PON3Q15166 354 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 ASTLQ6HA08 431 aaPredicted RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 C3orf33Q6P1S2 294 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 ACOT7LQ6ZUV0 252 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 TMEFF1Q8IYR6 380 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 C10orf53Q8N6V4 93 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 C15orf40Q8WUR7 153 aa13.89□□□□□ -0.19
PMS1-221ENST00000624204 INTS12Q96CB8 462 aaKnown RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 WDR77Q9BQA1 342 aaPredicted RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 ZNF223Q9UK11 482 aaPredicted RBP13.89□□□□□ -0.19
PMS1-221ENST00000624204 HEATR5BQ9P2D3 2071 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 A0A1W2PRU2 124 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 AMY2AP04746 511 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 RPLP2P05387 115 aaKnown RBP13.88□□□□□ -0.19
PMS1-221ENST00000624204 ADRA2CP18825 462 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 VAMP1P23763 118 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 CERS1P27544 350 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 CASRP41180 1078 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 FKBP1BP68106 108 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 ILF3Q12906 894 aaKnown RBP eCLIP13.88□□□□□ -0.19
PMS1-221ENST00000624204 ZNF627Q7L945 461 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 SYS1Q8N2H4 156 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 ZNF461Q8TAF7 563 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 STOML3Q8TAV4 291 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 SFXN5Q8TD22 340 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 ACTRT3Q9BYD9 372 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 SLC45A1Q9Y2W3 748 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 SCN10AQ9Y5Y9 1956 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 C4orf47A7E2U8 309 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 HLA-AP01891 365 aaKnown RBP13.88□□□□□ -0.19
PMS1-221ENST00000624204 CALCBP10092 127 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 GPR143P51810 404 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 DCDP81605 110 aaKnown RBP13.88□□□□□ -0.19
PMS1-221ENST00000624204 MRPL2Q5T653 305 aaKnown RBP13.88□□□□□ -0.19
PMS1-221ENST00000624204 FAM111BQ6SJ93 734 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 TMEM25Q86YD3 366 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 TMEM151BQ8IW70 566 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 VN1R2Q8NFZ6 395 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 OR51M1Q9H341 326 aa13.88□□□□□ -0.19
PMS1-221ENST00000624204 MTHFD2LQ9H903 347 aaPredicted RBP13.88□□□□□ -0.19
PMS1-221ENST00000624204 UQCC1Q9NVA1 299 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms