RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 WFDC6Q9BQY6 131 aa19.13■□□□□ 0.65
SRRT-218ENST00000620394 LEF1Q9UJU2 399 aaPredicted RBP19.13■□□□□ 0.65
SRRT-218ENST00000620394 LOC100289279A0A1B0GTE1 492 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 SLC35F4A4IF30 521 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 HMGB1P1B2RPK0 211 aaPredicted RBP19.12■□□□□ 0.65
SRRT-218ENST00000620394 NDUFS8O00217 210 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 FMO6PO60774 539 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 HPRP00739 348 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 AQP1P29972 269 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 SNRPD2P62316 118 aaKnown RBP19.12■□□□□ 0.65
SRRT-218ENST00000620394 ARF1P84077 181 aaKnown RBP19.12■□□□□ 0.65
SRRT-218ENST00000620394 RBBP4Q09028 425 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 C1DQ13901 141 aaKnown RBP19.12■□□□□ 0.65
SRRT-218ENST00000620394 EFNB3Q15768 340 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 CEACAM16Q2WEN9 425 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 NHLRC1Q6VVB1 395 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 DHDDSQ86SQ9 333 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 GPR137CQ8N3F9 429 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 NUP37Q8NFH4 326 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 ZNF837Q96EG3 531 aaPredicted RBP19.12■□□□□ 0.65
SRRT-218ENST00000620394 SORCS2Q96PQ0 1159 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 PIMREGQ9BSJ6 248 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 TMEM43Q9BTV4 400 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 SEC61A2Q9H9S3 476 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 TMEM27Q9HBJ8 222 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 CRLF2Q9HC73 371 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 INTS9Q9NV88 658 aaKnown RBP19.12■□□□□ 0.65
SRRT-218ENST00000620394 FKBP7Q9Y680 259 aa19.12■□□□□ 0.65
SRRT-218ENST00000620394 VWC2LB2RUY7 222 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 MS4A18H0YCH9 400 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 CBR1P16152 277 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 CALCRP30988 508 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 SERPINF1P36955 418 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 PDLIM4P50479 330 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 GGTLC2Q14390 218 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 ADIPOQQ15848 244 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 MS4A18Q3C1V0 323 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 MYPOPQ86VE0 399 aaPredicted RBP19.11■□□□□ 0.65
SRRT-218ENST00000620394 RETREG3Q86VR2 466 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 RANBP3LQ86VV4 465 aaPredicted RBP19.11■□□□□ 0.65
SRRT-218ENST00000620394 UEVLDQ8IX04 471 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 CCDC36Q8IYA8 594 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 C11orf65Q8NCR3 313 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 OR4F15Q8NGB8 312 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 CKAP2Q8WWK9 683 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 MSI2Q96DH6 328 aaKnown RBP19.11■□□□□ 0.65
SRRT-218ENST00000620394 MAGEB18Q96M61 343 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 ANKRD27Q96NW4 1050 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 ARHGDIGQ99819 225 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 ZNF442Q9H7R0 627 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 MRPL39Q9NYK5 338 aaKnown RBP19.11■□□□□ 0.65
SRRT-218ENST00000620394 SELENONQ9NZV5 590 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 SLC13A4Q9UKG4 626 aa19.11■□□□□ 0.65
SRRT-218ENST00000620394 ZNF503-AS2A6NEH8 195 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 ZNF99A8MXY4 864 aaPredicted RBP19.1■□□□□ 0.65
SRRT-218ENST00000620394 B9A039 149 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 LY6HO94772 140 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 APEHP13798 732 aaKnown RBP19.1■□□□□ 0.65
SRRT-218ENST00000620394 CDH12P55289 794 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 ZNF613Q6PF04 617 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 ZNF627Q7L945 461 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 C20orf196Q8IYI0 205 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 TSPEARQ8WU66 669 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 LRR1Q96L50 414 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 MOGAT1Q96PD6 335 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 CGREF1Q99674 301 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 ASPNQ9BXN1 380 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 PLK3Q9H4B4 646 aa19.1■□□□□ 0.65
SRRT-218ENST00000620394 CELA3BP08861 270 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 HLA-DOBP13765 273 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 NQO1P15559 274 aaKnown RBP19.09■□□□□ 0.65
SRRT-218ENST00000620394 ARR3P36575 388 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 PPOXP50336 477 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 POU3F1Q03052 451 aaPredicted RBP19.09■□□□□ 0.65
SRRT-218ENST00000620394 PUDPQ08623 228 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 SELPLGQ14242 412 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 PHYHD1Q5SRE7 291 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 LINC00114Q6XXX2 140 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 GPR32P1Q8NGA4 272 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 MYOZ1Q9NP98 299 aaPredicted RBP19.09■□□□□ 0.65
SRRT-218ENST00000620394 NDUFAF1Q9Y375 327 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 NOX1Q9Y5S8 564 aa19.09■□□□□ 0.65
SRRT-218ENST00000620394 IGHV2OR16-5A0A0B4J2B6 119 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 M0R3H8 397 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 CHP2O43745 196 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 MT-ATP6P00846 226 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 OR4A8P0C604 315 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 CBLP22681 906 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 NR4A2P43354 598 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 IDH3GP51553 393 aaPredicted RBP19.08■□□□□ 0.64
SRRT-218ENST00000620394 MTPNP58546 118 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 HGFACQ04756 655 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 RUNX1T1Q06455 604 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 NPTX1Q15818 432 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 DUSP7Q16829 419 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 CYP51A1Q16850 503 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 MEX3DQ86XN8 651 aaKnown RBP19.08■□□□□ 0.64
SRRT-218ENST00000620394 RFLNBQ8N5W9 214 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 SMYD1Q8NB12 490 aa19.08■□□□□ 0.64
SRRT-218ENST00000620394 SIKE1Q9BRV8 207 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms