RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 HCRTR1O43613 425 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 CLN5O75503 358 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 PDGFAP04085 211 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 GPX2P18283 190 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 OR1D4P47884 311 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 GRB2P62993 217 aaKnown RBP16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 AADACL3Q5VUY0 350 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 CST9LP1Q5W188 147 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 CD276Q5ZPR3 534 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 TMEM200AQ86VY9 491 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 SKA3Q8IX90 412 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 PELI3Q8N2H9 469 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 ZFPM2Q8WW38 1151 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 GHSRQ92847 366 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 PBX4Q9BYU1 374 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 A6NL46 340 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 SLCO2B1O94956 709 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 EEF1A2Q05639 463 aaKnown RBP16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 MFAP5Q13361 173 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 OR10K2Q6IF99 312 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 RPL3LQ92901 407 aaKnown RBP16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 BTBD17A6NE02 478 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 LALBAP00709 142 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 FOXK2Q01167 660 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 FAM122BQ7Z309 247 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 ADGRE4PQ86SQ3 457 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 SCN11AQ9UI33 1791 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 GPR171O14626 319 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 CBX7O95931 251 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 LYSMD2Q8IV50 215 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 LINC01599Q8WXQ3 324 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 C11orf54Q9H0W9 315 aaPredicted RBP16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 SEMA6CQ9H3T2 930 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 LYRM4Q9HD34 91 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 DYNLRB1Q9NP97 96 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 EMC9Q9Y3B6 208 aa16.12■□□□□ 0.17
HMGXB3-206ENST00000613459 TMED7-TICAM2A0A0A6YYA0 188 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 RAB11AP62491 216 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 EBPQ15125 230 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 PIGQQ9BRB3 760 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 SPHK1Q9NYA1 384 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 TMED7Q9Y3B3 224 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 PCDHGA5Q9Y5G8 931 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 LOC100289279A0A1B0GTE1 492 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 YOD1Q5VVQ6 348 aaPredicted RBP16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 SLC48A1Q6P1K1 146 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 CADM3Q8N126 398 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 EIF4E2O60573 245 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 TPPPO94811 219 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 ZNF728P0DKX0 622 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 RNF4P78317 190 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 TMEM64Q6YI46 380 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 FAM213BQ8TBF2 198 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 TM4SF18Q96CE8 201 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 HHIPQ96QV1 700 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 SGPP1Q9BX95 441 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 NTN4Q9HB63 628 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 EXOSC3Q9NQT5 275 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 LAMB4A4D0S4 1761 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 CHRM2P08172 466 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 CD14P08571 375 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 GJA4P35212 333 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 DCDP81605 110 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 STK11Q15831 433 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 MDGA2Q7Z553 956 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 CELF2-AS1Q8N7Q2 184 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 GMPR2Q9P2T1 348 aaKnown RBP16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 IGLV3-10A0A075B6K4 115 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 TMEM72A0PK05 275 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 C4orf47A7E2U8 309 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 A8MVM7 634 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 ACOT8O14734 319 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 YY2O15391 372 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 RGS11O94810 467 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 UTS2O95399 124 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 TRHRP34981 398 aaPredicted RBP16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 RFX2P48378 723 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 FCN2Q15485 313 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 HEPHL1Q6MZM0 1159 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 PAQR9Q6ZVX9 377 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 SIAH3Q8IW03 269 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 OR4Q3Q8NH05 313 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 MARC2Q969Z3 335 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 PRSS16Q9NQE7 514 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 TRAPPC2LQ9UL33 140 aa16.11■□□□□ 0.17
HMGXB3-206ENST00000613459 CTNSO60931 367 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 F13BP05160 661 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 PTGER4P35408 488 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 TGM4P49221 684 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 SLC25A43Q8WUT9 341 aaPredicted RBP16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 TNFRSF13CQ96RJ3 184 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 PIP5K1CO60331 668 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 SCRG1O75711 98 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 PVRP15151 417 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 TPMTP51580 245 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 CLDN17P56750 224 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 STEAP1BQ6NZ63 245 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 OVCH1Q7RTY7 1134 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 ADIPOR2Q86V24 386 aa16.1■□□□□ 0.17
HMGXB3-206ENST00000613459 LFNGQ8NES3 379 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms