RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TUBA1AQ71U36 451 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 DTX2Q86UW9 622 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 PRIMA1Q86XR5 153 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 RBM45Q8IUH3 476 aaKnown RBP12.03□□□□□ -0.48
SCAF1-203ENST00000598359 C11orf65Q8NCR3 313 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 C1orf162Q8NEQ5 155 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-203ENST00000598359 GPR32P1Q8NGA4 272 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 TRMT61AQ96FX7 289 aaKnown RBP12.03□□□□□ -0.48
SCAF1-203ENST00000598359 RADILQ96JH8 1075 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 B3GAT1Q9P2W7 334 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 TESQ9UGI8 421 aaKnown RBP12.03□□□□□ -0.48
SCAF1-203ENST00000598359 SLC13A4Q9UKG4 626 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 ANGPT4Q9Y264 503 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 ATP23Q9Y6H3 246 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 TLN2Q9Y4G6 2542 aa12.02□□□□□ -0.48
SCAF1-203ENST00000598359 TRAV36DV7A0A075B6V5 113 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF587BE7ETH6 402 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 ATP6V1G2-DDX39BF2Z307 99 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 M0QX08 132 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 TMCC2O75069 709 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 SERPINB7O75635 380 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 HPRP00739 348 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 C8BP07358 591 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 ACADSP16219 412 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF43P17038 809 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 PCSK6P29122 969 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 FABP6P51161 128 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 CDH12P55289 794 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 PCBP3P57721 371 aaKnown RBP12.02□□□□□ -0.49
SCAF1-203ENST00000598359 PRPS1P60891 318 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 NPTX1Q15818 432 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 TBRG1Q3YBR2 411 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 FAM69AQ5T7M9 428 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 ULK3Q6PHR2 472 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 SSX8Q7RTT4 187 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 ARPINQ7Z6K5 226 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 OR4D11Q8NGI4 311 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 OR1K1Q8NGR3 316 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 VANGL1Q8TAA9 524 aaPredicted RBP12.02□□□□□ -0.49
SCAF1-203ENST00000598359 SLC26A7Q8TE54 656 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 DNAJA4Q8WW22 397 aaPredicted RBP12.02□□□□□ -0.49
SCAF1-203ENST00000598359 SLC38A4Q969I6 547 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 SLC47A1Q96FL8 570 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 MOGAT1Q96PD6 335 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 DHRS9Q9BPW9 319 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 CACNG6Q9BXT2 260 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 MUC13Q9H3R2 512 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 KAT8Q9H7Z6 458 aaKnown RBP12.02□□□□□ -0.49
SCAF1-203ENST00000598359 C12orf10Q9HB07 376 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 TMEM27Q9HBJ8 222 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 MOKQ9UQ07 419 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 MGAT4BQ9UQ53 548 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 B3GALT5Q9Y2C3 310 aa12.02□□□□□ -0.49
SCAF1-203ENST00000598359 FBN1P35555 2871 aaKnown RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 NBEAL1Q6ZS30 2694 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 A0A087WUJ7 227 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 A0A0B4J2E0 115 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 A0A1B0GX12 115 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 CPSF4LA6NMK7 179 aaKnown RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 MS4A18H0YCH9 400 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 NME4O00746 187 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF432O94892 652 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 BGLAPP02818 100 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 HLA-DOBP13765 273 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 TTKP33981 857 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 SLC7A2P52569 658 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 ROR2Q01974 943 aaKnown RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 C1DQ13901 141 aaKnown RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 FXNQ16595 210 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 MS4A18Q3C1V0 323 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 RABL3Q5HYI8 236 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 AGAP6Q5VW22 663 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 CARD17Q5XLA6 110 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 C11orf71Q6IPW1 123 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 KLHL24Q6TFL4 600 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 H1FNTQ75WM6 255 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 RANBP3LQ86VV4 465 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 TSPYL5Q86VY4 417 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 SLC15A3Q8IY34 581 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 C10orf53Q8N6V4 93 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 OR6T1Q8NGN1 323 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 OR10A6Q8NH74 314 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 PYDC1Q8WXC3 89 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 BCL2L2Q92843 193 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 LRRC58Q96CX6 371 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 ZNF837Q96EG3 531 aaPredicted RBP12.01□□□□□ -0.49
SCAF1-203ENST00000598359 HS6ST2Q96MM7 605 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 OXGR1Q96P68 337 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 MCHR1Q99705 422 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 ARHGDIGQ99819 225 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 NELFAQ9H3P2 528 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 SEC61A2Q9H9S3 476 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 FAIMQ9NVQ4 179 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 ADA2Q9NZK5 511 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 SELENONQ9NZV5 590 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 USP22Q9UPT9 525 aa12.01□□□□□ -0.49
SCAF1-203ENST00000598359 STAB1Q9NY15 2570 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms