RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 MST1LQ2TV78 715 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 CEACAM16Q2WEN9 425 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 CARD17Q5XLA6 110 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 TTC33Q6PID6 262 aaPredicted RBP13.13□□□□□ -0.31
LIG1-215ENST00000597901 WDR88Q6ZMY6 472 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 PXKQ7Z7A4 578 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 TSPYL5Q86VY4 417 aaPredicted RBP13.13□□□□□ -0.31
LIG1-215ENST00000597901 C20orf196Q8IYI0 205 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 FAM169BQ8N8A8 192 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 MAPK1IP1LQ8NDC0 245 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 OR8J3Q8NGG0 315 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 ADAMTS16Q8TE57 1224 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 RASSF5Q8WWW0 418 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 LRR1Q96L50 414 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 ZNF583Q96ND8 569 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 NOX1Q9Y5S8 564 aa13.13□□□□□ -0.31
LIG1-215ENST00000597901 NIPBLQ6KC79 2804 aaeCLIP13.12□□□□□ -0.31
LIG1-215ENST00000597901 TRAPPC13A5PLN9 417 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 ZNF726A6NNF4 738 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 FXYD1O00168 92 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 MRASO14807 208 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 CH25HO95992 272 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 CRYAAP02489 173 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 BMP4P12644 408 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 PCSK6P29122 969 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 POU3F1Q03052 451 aaPredicted RBP13.12□□□□□ -0.31
LIG1-215ENST00000597901 PUDPQ08623 228 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 MAPRE2Q15555 327 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 C3orf36Q3SXR2 165 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 REP15Q6BDI9 236 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 SNX32Q86XE0 403 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 WDFY1Q8IWB7 410 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 OR5J2Q8NH18 312 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 C10orf82Q8WW14 230 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 RHNO1Q9BSD3 238 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 KATNB1Q9BVA0 655 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 PCDHAC1Q9H158 963 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 MED29Q9NX70 200 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 SLC7A7Q9UM01 511 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 USP22Q9UPT9 525 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 SH3GLB1Q9Y371 365 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 PMF1-BGLAPU3KQ54 211 aa13.12□□□□□ -0.31
LIG1-215ENST00000597901 BBIP1A8MTZ0 92 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 ZNF99A8MXY4 864 aaPredicted RBP13.11□□□□□ -0.31
LIG1-215ENST00000597901 OR6A2O95222 327 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 IGLV1-44P01699 117 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 ADORA3P0DMS8 318 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 NAAAQ02083 359 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 ZP4Q12836 540 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 CAMK2DQ13557 499 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 ZNF74Q16587 644 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 SWI5Q1ZZU3 235 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 CCDC36Q8IYA8 594 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 LRRC17Q8N6Y2 441 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 PCYOX1LQ8NBM8 494 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 OR10H5Q8NGA6 315 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 HTRA1Q92743 480 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 PROX1Q92786 737 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 FBXO17Q96EF6 278 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 MPP4Q96JB8 637 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 KCNS3Q9BQ31 491 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 PRSS27Q9BQR3 290 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 CCDC134Q9H6E4 229 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 MOV10Q9HCE1 1003 aaKnown RBP13.11□□□□□ -0.31
LIG1-215ENST00000597901 GID8Q9NWU2 228 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 TAS2R5Q9NYW4 299 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 BAG5Q9UL15 447 aa13.11□□□□□ -0.31
LIG1-215ENST00000597901 ZNF503-AS2A6NEH8 195 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 C11orf98E9PRG8 122 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 H7C417 338 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 SERPINI2O75830 405 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 IGKV3-15P01624 115 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 CECR9P0C854 216 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 ARR3P36575 388 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 SERPINF1P36955 418 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 NUDT6P53370 316 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 DSCR9P59020 149 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 KRTAP1-1Q07627 177 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 HSP90B2PQ58FF3 399 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 ERICH5Q6P6B1 374 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 CARM1Q86X55 608 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 OR6N1Q8NGY5 312 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 ZNF426Q9BUY5 554 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 SLC19A3Q9BZV2 496 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 SEC61A2Q9H9S3 476 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 B3GAT2Q9NPZ5 323 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 NANSQ9NR45 359 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 B3GNT2Q9NY97 397 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 POFUT2Q9Y2G5 429 aa13.1□□□□□ -0.31
LIG1-215ENST00000597901 IGHV4-30-2A0A087WSY4 118 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 INAFM1C9JVW0 142 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 SEC14L2O76054 403 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 F12P00748 615 aaPredicted RBP13.09□□□□□ -0.31
LIG1-215ENST00000597901 IFNA14P01570 189 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 HIST1H2ABP04908 130 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 CELA3BP08861 270 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 IFNGR1P15260 489 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 TNFRSF1BP20333 461 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 CALCRP30988 508 aa13.09□□□□□ -0.31
LIG1-215ENST00000597901 KDELR2P33947 212 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms