RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 MT-ATP6P00846 226 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 NPPAP01160 153 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 TNFRSF1BP20333 461 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 PUDPQ08623 228 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 CEACAM16Q2WEN9 425 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 ZNF544Q6NX49 715 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 TTC33Q6PID6 262 aaPredicted RBP12.1□□□□□ -0.47
APOC1-208ENST00000592535 NHLRC1Q6VVB1 395 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 ANKK1Q8NFD2 765 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 C10orf82Q8WW14 230 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 RASSF5Q8WWW0 418 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 HS6ST2Q96MM7 605 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 ZNF583Q96ND8 569 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 SLC38A2Q96QD8 506 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 PCDHAC1Q9H158 963 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 ARMCX1Q9P291 453 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 CAPN7Q9Y6W3 813 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 ZFHX3Q15911 3703 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 ARFGEF3Q5TH69 2177 aa12.1□□□□□ -0.47
APOC1-208ENST00000592535 SLC35F4A4IF30 521 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 RNF223E7ERA6 249 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 C11orf98E9PRG8 122 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 KPNA4O00629 521 aaPredicted RBP12.09□□□□□ -0.47
APOC1-208ENST00000592535 SERPINI2O75830 405 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 SEC14L2O76054 403 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 CH25HO95992 272 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 AHCYP23526 432 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 MDH1P40925 334 aaKnown RBP12.09□□□□□ -0.47
APOC1-208ENST00000592535 ZNF74Q16587 644 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 ERICH5Q6P6B1 374 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 DNM1P46Q6ZS02 220 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 CARM1Q86X55 608 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 C20orf196Q8IYI0 205 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 POU5F2Q8N7G0 328 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 PCYOX1LQ8NBM8 494 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 MAPK1IP1LQ8NDC0 245 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 OR5J2Q8NH18 312 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 PROX1Q92786 737 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 RCN3Q96D15 328 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 ZNF317Q96PQ6 595 aaPredicted RBP12.09□□□□□ -0.47
APOC1-208ENST00000592535 SEC61A2Q9H9S3 476 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 BARX1Q9HBU1 254 aaPredicted RBP12.09□□□□□ -0.47
APOC1-208ENST00000592535 GID8Q9NWU2 228 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 CRNNQ9UBG3 495 aaPredicted RBP12.09□□□□□ -0.47
APOC1-208ENST00000592535 SH3GLB1Q9Y371 365 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 NOX1Q9Y5S8 564 aa12.09□□□□□ -0.47
APOC1-208ENST00000592535 ZNF503-AS2A6NEH8 195 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 FAM220BPB1ANY3 271 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 SSX4O60224 188 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 SHOX2O60902 331 aaPredicted RBP12.08□□□□□ -0.48
APOC1-208ENST00000592535 IGLV1-44P01699 117 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 CELA3BP08861 270 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 CECR9P0C854 216 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 ADORA3P0DMS8 318 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 HOXB1P14653 301 aaPredicted RBP12.08□□□□□ -0.48
APOC1-208ENST00000592535 APOBEC3AP31941 199 aaPredicted RBP12.08□□□□□ -0.48
APOC1-208ENST00000592535 NAAAQ02083 359 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 PXKQ7Z7A4 578 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 MYPOPQ86VE0 399 aaPredicted RBP12.08□□□□□ -0.48
APOC1-208ENST00000592535 LRRC17Q8N6Y2 441 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 HTRA1Q92743 480 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 MPP4Q96JB8 637 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 ADAD1Q96M93 576 aaKnown RBP12.08□□□□□ -0.48
APOC1-208ENST00000592535 PRSS27Q9BQR3 290 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 ZNF426Q9BUY5 554 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 KATNB1Q9BVA0 655 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 REG4Q9BYZ8 158 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 FN1P02751 2386 aaKnown RBP12.08□□□□□ -0.48
APOC1-208ENST00000592535 CSPG4Q6UVK1 2322 aa12.08□□□□□ -0.48
APOC1-208ENST00000592535 ZNF726A6NNF4 738 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 ZNF99A8MXY4 864 aaPredicted RBP12.07□□□□□ -0.48
APOC1-208ENST00000592535 SLC22A2O15244 555 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 IGKV3-15P01624 115 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 CRYAAP02489 173 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 IFNGR1P15260 489 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 CBR1P16152 277 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 PAX7P23759 505 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 CALCRP30988 508 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 OR1E2P47887 323 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 NUDT6P53370 316 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 CAMK2DQ13557 499 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 KRTAP21-3Q3LHN1 58 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 C3orf36Q3SXR2 165 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 LRRC23Q53EV4 343 aaPredicted RBP12.07□□□□□ -0.48
APOC1-208ENST00000592535 DEF8Q6ZN54 512 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 NKAIN4Q8IVV8 208 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 FAM169BQ8N8A8 192 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 OR2T12Q8NG77 320 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 OR6N1Q8NGY5 312 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 LRR1Q96L50 414 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 KCNS3Q9BQ31 491 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 MEPEQ9NQ76 525 aaPredicted RBP12.07□□□□□ -0.48
APOC1-208ENST00000592535 NANSQ9NR45 359 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 CMTM6Q9NX76 183 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 TAS2R5Q9NYW4 299 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 GMPR2Q9P2T1 348 aaKnown RBP12.07□□□□□ -0.48
APOC1-208ENST00000592535 NAV3Q8IVL0 2385 aa12.07□□□□□ -0.48
APOC1-208ENST00000592535 H7C417 338 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms