RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SGTBQ96EQ0 304 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 ALKBH3Q96Q83 286 aaPredicted RBP14.26□□□□□ -0.13
ERBB2-222ENST00000584908 C1orf21Q9H246 121 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 ESRP2Q9H6T0 727 aaKnown RBP14.26□□□□□ -0.13
ERBB2-222ENST00000584908 SLC17A5Q9NRA2 495 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 NPAP1Q9NZP6 1156 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 NDUFAF4Q9P032 175 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 HIVEP1P15822 2718 aa14.26□□□□□ -0.13
ERBB2-222ENST00000584908 PRRC2AP48634 2157 aaKnown RBP14.25□□□□□ -0.13
ERBB2-222ENST00000584908 SLC35F4A4IF30 521 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 KRT33AO76009 404 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 OR6A2O95222 327 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 HIST1H2ABP04908 130 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 FUT1P19526 365 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 AHCYP23526 432 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 YAP1P46937 504 aaKnown RBP14.25□□□□□ -0.13
ERBB2-222ENST00000584908 IST1P53990 364 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 IL1RL1Q01638 556 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 C9orf135Q5VTT2 229 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 ZNF704Q6ZNC4 412 aaPredicted RBP14.25□□□□□ -0.13
ERBB2-222ENST00000584908 HIST3H2AQ7L7L0 130 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 TRPM8Q7Z2W7 1104 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 NANOGNBQ7Z5D8 188 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 CYP4Z1Q86W10 505 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 WDFY1Q8IWB7 410 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 OR1K1Q8NGR3 316 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 OR6X1Q8NH79 312 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 ACOT11Q8WXI4 607 aaPredicted RBP14.25□□□□□ -0.13
ERBB2-222ENST00000584908 HIST1H2ACQ93077 130 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 PYURFQ96I23 114 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 TXNDC15Q96J42 360 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 ADAD1Q96M93 576 aaKnown RBP14.25□□□□□ -0.13
ERBB2-222ENST00000584908 NMNAT1Q9HAN9 279 aaPredicted RBP14.25□□□□□ -0.13
ERBB2-222ENST00000584908 GPR35Q9HC97 309 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 OBP2BQ9NPH6 170 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 MED29Q9NX70 200 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 AMDHD2Q9Y303 409 aa14.25□□□□□ -0.13
ERBB2-222ENST00000584908 HEATR1Q9H583 2144 aaKnown RBP14.25□□□□□ -0.13
ERBB2-222ENST00000584908 A0A087WUU8 490 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 A0A1W2PRQ8 180 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 DPRXA6NFQ7 191 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 C11orf98E9PRG8 122 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 UMPSP11172 480 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 HOXB1P14653 301 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-222ENST00000584908 RHCEP18577 417 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 CD53P19397 219 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 PAX7P23759 505 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 DNASE1P24855 282 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 MSX2P35548 267 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-222ENST00000584908 RPS4XP62701 263 aaKnown RBP14.24□□□□□ -0.13
ERBB2-222ENST00000584908 VLDLRP98155 873 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 ROR2Q01974 943 aaKnown RBP14.24□□□□□ -0.13
ERBB2-222ENST00000584908 PRKCDQ05655 676 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 DGCR6Q14129 220 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 HMBOX1Q6NT76 420 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 ANKRD16Q6P6B7 361 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 RINLQ6ZS11 566 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 SLC35D2Q76EJ3 337 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 ZNF627Q7L945 461 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 GPR137CQ8N3F9 429 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 OR52N5Q8NH56 324 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 BCL2L2Q92843 193 aaPredicted RBP14.24□□□□□ -0.13
ERBB2-222ENST00000584908 BPIFA2Q96DR5 249 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 DHRS1Q96LJ7 313 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 NSMCE2Q96MF7 247 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 EMC6Q9BV81 110 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 CXXC4Q9H2H0 198 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 NELFAQ9H3P2 528 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 ACTR3BQ9P1U1 418 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 RHCGQ9UBD6 479 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 PLEKHA6Q9Y2H5 1048 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 RNF115Q9Y4L5 304 aa14.24□□□□□ -0.13
ERBB2-222ENST00000584908 ARPC4-TTLL3A0A0A6YYG9 625 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 NPIPB13A6NJU9 1138 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 NPIPB4C9JG80 1138 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 RNF13O43567 381 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 PIP5K1CO60331 668 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 PLAUP00749 431 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 CD3EP07766 207 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 IFNGR1P15260 489 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 LSM11P83369 360 aaKnown RBP eCLIP14.23□□□□□ -0.13
ERBB2-222ENST00000584908 RPL18Q07020 188 aaKnown RBP14.23□□□□□ -0.13
ERBB2-222ENST00000584908 BSPH1Q075Z2 132 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 ACKR1Q16570 336 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 TBRG1Q3YBR2 411 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 ANKDD1AQ495B1 522 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 MTX3Q5HYI7 312 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 PHYHD1Q5SRE7 291 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 C20orf204Q6ZNR8 217 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 MBOAT2Q6ZWT7 520 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 LILRB1Q8NHL6 650 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-222ENST00000584908 SLC7A13Q8TCU3 470 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 IGFBPL1Q8WX77 278 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 ALPK1Q96QP1 1244 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 FOXC2Q99958 501 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 MUC13Q9H3R2 512 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 CRLF2Q9HC73 371 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 CCM2LQ9NUG4 571 aaPredicted RBP14.23□□□□□ -0.13
ERBB2-222ENST00000584908 TAS2R1Q9NYW7 299 aa14.23□□□□□ -0.13
ERBB2-222ENST00000584908 PRPF19Q9UMS4 504 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms