RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 RNF13O43567 381 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 ASAH2BP0C7U1 165 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 HLA-DOBP13765 273 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 CD40P25942 277 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 LGALS3BPQ08380 585 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 TBRG1Q3YBR2 411 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 GLYATQ6IB77 296 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 VTCN1Q7Z7D3 282 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 TMEM123Q8N131 208 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 PIAS4Q8N2W9 510 aaPredicted RBP23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 SGTBQ96EQ0 304 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 FNDC11Q9BVV2 318 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 FAIMQ9NVQ4 179 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 A4GNTQ9UNA3 340 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 SAMD4AQ9UPU9 718 aaKnown RBP23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 ABCA4P78363 2273 aa23.81■■□□□ 1.4
SMARCD2-210ENST00000584400 C11orf98E9PRG8 122 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 SERPINI2O75830 405 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 FAM107AO95990 144 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 FUT1P19526 365 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 NKX6-1P78426 367 aaPredicted RBP23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 HIKESHIQ53FT3 197 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 SHEQ5VZ18 495 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 C16orf89Q6UX73 402 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 CYP4Z1Q86W10 505 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 C20orf196Q8IYI0 205 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 KBTBD8Q8NFY9 601 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 OR6N1Q8NGY5 312 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 HSH2DQ96JZ2 352 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 EMC6Q9BV81 110 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 CRLF2Q9HC73 371 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 GPR35Q9HC97 309 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 MED29Q9NX70 200 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 TAS2R5Q9NYW4 299 aa23.8■■□□□ 1.4
SMARCD2-210ENST00000584400 M0R3G1 203 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 UGT2B15P54855 530 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 MXRA7P84157 204 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 SAMD4BQ5PRF9 694 aaKnown RBP23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 CARD17Q5XLA6 110 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 SLC22A25Q6T423 547 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 LINGO2Q7L985 606 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 TGIF2LYQ8IUE0 185 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 CCDC36Q8IYA8 594 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 OFCC1Q8IZS5 231 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 LRRC17Q8N6Y2 441 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 LILRB1Q8NHL6 650 aaPredicted RBP23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 BCL2L2Q92843 193 aaPredicted RBP23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 TXNDC15Q96J42 360 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 CISD1Q9NZ45 108 aaKnown RBP23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 EGFL7Q9UHF1 273 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 POU2F3Q9UKI9 436 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 CCDC168Q8NDH2 2452 aa23.79■■□□□ 1.4
SMARCD2-210ENST00000584400 ARPC4-TTLL3A0A0A6YYG9 625 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 BLOC1S5-TXNDC5H3BN57 136 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 OR7A10O76100 309 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 IFNGR1P15260 489 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 NCK1P16333 377 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 CDH11P55287 796 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 KRT72Q14CN4 511 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 TRAM2Q15035 370 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 CEACAM16Q2WEN9 425 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 SPATS1Q496A3 300 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 SLC35D2Q76EJ3 337 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 SLC46A3Q7Z3Q1 461 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 OR6X1Q8NH79 312 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 PFN4Q8NHR9 129 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 SMAP2Q8WU79 429 aaPredicted RBP23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 LIPHQ8WWY8 451 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 C1QTNF6Q9BXI9 259 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 ARL8BQ9NVJ2 186 aa23.78■■□□□ 1.4
SMARCD2-210ENST00000584400 ZNF99A8MXY4 864 aaPredicted RBP23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 HSD17B1P14061 328 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 BIDP55957 195 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 RPS4XP62701 263 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 ARF1P84077 181 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 FOXD4Q12950 439 aaPredicted RBP23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 CAMK2DQ13557 499 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 NHLRC1Q6VVB1 395 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 HDDC2Q7Z4H3 204 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 CCDC197Q8NCU1 140 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 ULBP2Q9BZM5 246 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 GORASP2Q9H8Y8 452 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 MAGEL2Q9UJ55 1249 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 LAMP3Q9UQV4 416 aa23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 FAM32AQ9Y421 112 aaKnown RBP23.77■■□□□ 1.4
SMARCD2-210ENST00000584400 A0A096LPE4 126 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 A0A1W2PPZ6 126 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 A0A1W2PRG6 482 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 SHISA9B4DS77 424 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 BCL10O95999 233 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 YAP1P46937 504 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 CSNK1A1P48729 337 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 ADAM8P78325 824 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 SLC25A3Q00325 362 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 RNF113BQ8IZP6 322 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 RNF148Q8N7C7 305 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 GSX2Q9BZM3 304 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 C20orf141Q9NUB4 165 aa23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 DCAF13Q9NV06 445 aaKnown RBP23.76■■□□□ 1.39
SMARCD2-210ENST00000584400 STX18Q9P2W9 335 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms