RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 EDF1O60869 148 aaKnown RBP17.53■□□□□ 0.4
CLN6-207ENST00000566347 HPRP00739 348 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 MT-ATP6P00846 226 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 ARR3P36575 388 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 MTPNP58546 118 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 POU3F1Q03052 451 aaPredicted RBP17.53■□□□□ 0.4
CLN6-207ENST00000566347 PUDPQ08623 228 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 NFYCQ13952 458 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 TMEM249Q2WGJ8 235 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 METTL21CQ5VZV1 264 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 PATL1Q86TB9 770 aaKnown RBP17.53■□□□□ 0.4
CLN6-207ENST00000566347 RETREG3Q86VR2 466 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 C20orf196Q8IYI0 205 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 C10orf53Q8N6V4 93 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 NUP37Q8NFH4 326 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 WFDC6Q9BQY6 131 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 KAT8Q9H7Z6 458 aaKnown RBP17.53■□□□□ 0.4
CLN6-207ENST00000566347 USP22Q9UPT9 525 aa17.53■□□□□ 0.4
CLN6-207ENST00000566347 DNHD1Q96M86 4753 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 VSTM5A8MXK1 200 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 M0QX08 132 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 M0R3G1 203 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 M0R3H8 397 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 CHP2O43745 196 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 GPRIN2O60269 458 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 HLA-DOBP13765 273 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 VLDLRP98155 873 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 SELPLGQ14242 412 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 EFNB3Q15768 340 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 ADIPOQQ15848 244 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 DUSP7Q16829 419 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 SLC46A3Q7Z3Q1 461 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 PXKQ7Z7A4 578 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 SNX32Q86XE0 403 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 HIPK1Q86Z02 1210 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 IL17RDQ8NFM7 739 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 ZNF837Q96EG3 531 aaPredicted RBP17.52■□□□□ 0.4
CLN6-207ENST00000566347 MOGAT1Q96PD6 335 aa17.52■□□□□ 0.4
CLN6-207ENST00000566347 A0A0G2JND7 137 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 SLC35F4A4IF30 521 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 ZNF726A6NNF4 738 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 NDUFS8O00217 210 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 PLPP3O14495 311 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 OPN1SWP03999 348 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 OR4A8P0C604 315 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 CALCRP30988 508 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 PCGF2P35227 344 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 CAPZA2P47755 286 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 PDLIM4P50479 330 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 IDH3GP51553 393 aaPredicted RBP17.51■□□□□ 0.39
CLN6-207ENST00000566347 C6orf52Q5T4I8 152 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 INTS11Q5TA45 600 aaKnown RBP17.51■□□□□ 0.39
CLN6-207ENST00000566347 CARD17Q5XLA6 110 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 VHLLQ6RSH7 139 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 LINC00114Q6XXX2 140 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 OR6T1Q8NGN1 323 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 NANOS1Q8WY41 292 aaKnown RBP17.51■□□□□ 0.39
CLN6-207ENST00000566347 SORCS2Q96PQ0 1159 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 EMC6Q9BV81 110 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 ZNF442Q9H7R0 627 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 SEC61A2Q9H9S3 476 aa17.51■□□□□ 0.39
CLN6-207ENST00000566347 MYOZ1Q9NP98 299 aaPredicted RBP17.51■□□□□ 0.39
CLN6-207ENST00000566347 YLPM1P49750 1951 aaKnown RBP17.5■□□□□ 0.39
CLN6-207ENST00000566347 COL6A5A8TX70 2615 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 LY6HO94772 140 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 VIMP08670 466 aaKnown RBP17.5■□□□□ 0.39
CLN6-207ENST00000566347 CELA3BP08861 270 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 USF1P22415 310 aaPredicted RBP17.5■□□□□ 0.39
CLN6-207ENST00000566347 AHCYP23526 432 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 PPOXP50336 477 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 NPRL3Q12980 569 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 ENTPD8Q5MY95 495 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 PHYHD1Q5SRE7 291 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 MDP1Q86V88 176 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 GPR32P1Q8NGA4 272 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 OR5J2Q8NH18 312 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 SLC26A7Q8TE54 656 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 RASSF5Q8WWW0 418 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 MDFIQ99750 246 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 VRK1Q99986 396 aaPredicted RBP17.5■□□□□ 0.39
CLN6-207ENST00000566347 PIMREGQ9BSJ6 248 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 PLK3Q9H4B4 646 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 MRGBPQ9NV56 204 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 MED29Q9NX70 200 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 POFUT2Q9Y2G5 429 aa17.5■□□□□ 0.39
CLN6-207ENST00000566347 IGHV2OR16-5A0A0B4J2B6 119 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 CPSF4LA6NMK7 179 aaKnown RBP17.49■□□□□ 0.39
CLN6-207ENST00000566347 LRRN3E7EW58 273 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 OR6A2O95222 327 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 IFNA2P01563 188 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 H2AFXP16104 143 aaPredicted RBP17.49■□□□□ 0.39
CLN6-207ENST00000566347 HGFACQ04756 655 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 NPTX1Q15818 432 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 CHRFAM7AQ494W8 412 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 TTC33Q6PID6 262 aaPredicted RBP17.49■□□□□ 0.39
CLN6-207ENST00000566347 NHLRC1Q6VVB1 395 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 ZNF627Q7L945 461 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 MYPOPQ86VE0 399 aaPredicted RBP17.49■□□□□ 0.39
CLN6-207ENST00000566347 OR6N1Q8NGY5 312 aa17.49■□□□□ 0.39
CLN6-207ENST00000566347 OR10A6Q8NH74 314 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms