RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 HPRP00739 348 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 BGLAPP02818 100 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 HLA-DOBP13765 273 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 NCK1P16333 377 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 HOXB4P17483 251 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 PTAFRP25105 342 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 PRPS1P60891 318 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 UBE2NP61088 152 aaKnown RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 ROR2Q01974 943 aaKnown RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 PMS2P3Q13401 168 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 TBRG1Q3YBR2 411 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 GLYATQ6IB77 296 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 C5orf46Q6UWT4 87 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 LINC00114Q6XXX2 140 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 B3GLCTQ6Y288 498 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 RINLQ6ZS11 566 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 H1FNTQ75WM6 255 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 TSPYL5Q86VY4 417 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 UEVLDQ8IX04 471 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 DEPDC4Q8N2C3 294 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 GPR137CQ8N3F9 429 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 FAM156AQ8NDB6 213 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 C1orf162Q8NEQ5 155 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 OR1K1Q8NGR3 316 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 ADAMTS16Q8TE57 1224 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 LZICQ8WZA0 190 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 TRMT61AQ96FX7 289 aaKnown RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 MOGAT1Q96PD6 335 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 BDH2Q9BUT1 245 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 AMBRA1Q9C0C7 1298 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 B3GAT1Q9P2W7 334 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 EGFL7Q9UHF1 273 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 MGAT4BQ9UQ53 548 aa11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 MAP1AP78559 2803 aaPredicted RBP11.93□□□□□ -0.5
VPS9D1-204ENST00000565023 ALPK2Q86TB3 2170 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 PLCE1Q9P212 2302 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 TRAPPC13A5PLN9 417 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 C11orf98E9PRG8 122 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 M0R3G1 203 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 CHP2O43745 196 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 FZD7O75084 574 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 UBOX5O94941 541 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 WNT11O96014 354 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 SERPINA1P01009 418 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 THY1P04216 161 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 AHCYP23526 432 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 OR1E2P47887 323 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 FABP6P51161 128 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 POU3F1Q03052 451 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 PRSS57Q6UWY2 283 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 DEF8Q6ZN54 512 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 SSX8Q7RTT4 187 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 BIVMQ86UB2 503 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 ARHGAP24Q8N264 748 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 C17orf78Q8N4C9 275 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 HTRA1Q92743 480 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 FAM162AQ96A26 154 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 TPD52L3Q96J77 140 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 TMEM43Q9BTV4 400 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 TRAF4Q9BUZ4 470 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 POLR2J2Q9GZM3 115 aaKnown RBP11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 POLR2J3Q9H1A7 115 aaKnown RBP11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 C1orf21Q9H246 121 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 GORASP2Q9H8Y8 452 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 ZNF701Q9NV72 531 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 FAIMQ9NVQ4 179 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 MED29Q9NX70 200 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 GDF2Q9UK05 429 aaPredicted RBP11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 SLC7A7Q9UM01 511 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 MOKQ9UQ07 419 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 B3GALT5Q9Y2C3 310 aa11.92□□□□□ -0.5
VPS9D1-204ENST00000565023 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 MS4A18H0YCH9 400 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 TRAF3IP2O43734 574 aaPredicted RBP11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 AKAP8O43823 692 aaKnown RBP11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 ZNF682O95780 498 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 LY6G6DO95868 133 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 CH25HO95992 272 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 UMPSP11172 480 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 TCN1P20061 433 aaPredicted RBP11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 CAPZA2P47755 286 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 ARF1P84077 181 aaKnown RBP11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 CLEC12BQ2HXU8 276 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 CEACAM16Q2WEN9 425 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 MS4A18Q3C1V0 323 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 AGAP6Q5VW22 663 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 TTC33Q6PID6 262 aaPredicted RBP11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 WDR88Q6ZMY6 472 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 VTCN1Q7Z7D3 282 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 FBXL14Q8N1E6 418 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 MAPK1IP1LQ8NDC0 245 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 OR6S1Q8NH40 331 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 ZNF837Q96EG3 531 aaPredicted RBP11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 TXNDC15Q96J42 360 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 HS6ST2Q96MM7 605 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 ZNF426Q9BUY5 554 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 DCAF13Q9NV06 445 aaKnown RBP11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 TAS2R1Q9NYW7 299 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 MAGEL2Q9UJ55 1249 aa11.91□□□□□ -0.5
VPS9D1-204ENST00000565023 RPS6KA6Q9UK32 745 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms