RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HSF1Q00613 529 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 PUDPQ08623 228 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 GINS1Q14691 196 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 IGFBP7Q16270 282 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 MS4A18Q3C1V0 323 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 GXYLT1Q4G148 440 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 SLX4IPQ5VYV7 408 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 SLC27A4Q6P1M0 643 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 ZNF773Q6PK81 442 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 DPY19L2P2Q6ZN68 376 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 CHMP1BQ7LBR1 199 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 GPR141Q7Z602 305 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 OR2T33Q8NG76 320 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 ZNF420Q8TAQ5 688 aaPredicted RBP11.54□□□□□ -0.56
SPG7-209ENST00000564047 FBLIM1Q8WUP2 373 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 MUS81Q96NY9 551 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 NRIP3Q9NQ35 241 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 TNFRSF10DQ9UBN6 386 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 BLOC1S6Q9UL45 172 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 NDRG4Q9ULP0 352 aaKnown RBP11.54□□□□□ -0.56
SPG7-209ENST00000564047 BAIAP2Q9UQB8 552 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 CAMK2AQ9UQM7 478 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 RASD1Q9Y272 281 aa11.54□□□□□ -0.56
SPG7-209ENST00000564047 C2CD3Q4AC94 2353 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 CCDC160A6NGH7 325 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 MCIDASD6RGH6 385 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 NPIPA2E9PIF3 369 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 NPIPA3F8WFD2 350 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 BHLHE40O14503 412 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 ARPC3O15145 178 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 SMAD9O15198 467 aaKnown RBP11.53□□□□□ -0.56
SPG7-209ENST00000564047 RNF13O43567 381 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 SYNGR4O95473 234 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 CD14P08571 375 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 APEHP13798 732 aaKnown RBP11.53□□□□□ -0.56
SPG7-209ENST00000564047 AHCYP23526 432 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 GRK5P34947 590 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 PTGS2P35354 604 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 GGT2P36268 569 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 RPL4P36578 427 aaKnown RBP11.53□□□□□ -0.56
SPG7-209ENST00000564047 CLEC12AQ5QGZ9 265 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 ZNF691Q5VV52 312 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 C12orf73Q69YU5 71 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 TMEM225Q6GV28 225 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 Q6ZPB1 254 aaPredicted RBP11.53□□□□□ -0.56
SPG7-209ENST00000564047 PXKQ7Z7A4 578 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 LNX2Q8N448 690 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 SETD9Q8NE22 299 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 ANKK1Q8NFD2 765 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 OR4Q3Q8NH05 313 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 ZPLD1Q8TCW7 415 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 ZNF566Q969W8 418 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 ZNF845Q96IR2 970 aaPredicted RBP11.53□□□□□ -0.56
SPG7-209ENST00000564047 OXGR1Q96P68 337 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 IFT27Q9BW83 186 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 TEX12Q9BXU0 123 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 INIPQ9NRY2 104 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 ASF1BQ9NVP2 202 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 IL20RAQ9UHF4 553 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 MCTS1Q9ULC4 181 aaKnown RBP11.53□□□□□ -0.56
SPG7-209ENST00000564047 GMPPBQ9Y5P6 360 aa11.53□□□□□ -0.56
SPG7-209ENST00000564047 NPIPB13A6NJU9 1138 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 TTLL8A6PVC2 850 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 AHRRA9YTQ3 701 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 ZNF814B7Z6K7 855 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 NPIPB4C9JG80 1138 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 C11orf98E9PRG8 122 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 H3BSA7 217 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 IMPA2O14732 288 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 IDH3BO43837 385 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 PPP1R3DO95685 299 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 CLIC3O95833 236 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 IGHMP01871 453 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 HMGN1P05114 100 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 F13BP05160 661 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 KLK2P20151 261 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 CDH15P55291 814 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 CTXN1P60606 82 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 POU4F3Q15319 338 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 SF3B4Q15427 424 aaKnown RBP eCLIP11.52□□□□□ -0.573e-6■■■■□ 21.5
SPG7-209ENST00000564047 C3AR1Q16581 482 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 PGGHGQ32M88 737 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 PRR30Q53SZ7 412 aaPredicted RBP11.52□□□□□ -0.57
SPG7-209ENST00000564047 TMEM236Q5W0B7 351 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 ABLIM2Q6H8Q1 611 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 ACSM5Q6NUN0 579 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 FGD2Q7Z6J4 655 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 IGFN1Q86VF2 1251 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 ERI1Q8IV48 349 aaKnown RBP11.52□□□□□ -0.57
SPG7-209ENST00000564047 DEPDC4Q8N2C3 294 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 IQCF1Q8N6M8 205 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 NMD3Q96D46 503 aaKnown RBP11.52□□□□□ -0.57
SPG7-209ENST00000564047 UCN2Q96RP3 112 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 APOL4Q9BPW4 351 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 KATNB1Q9BVA0 655 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 SF3B5Q9BWJ5 86 aaKnown RBP11.52□□□□□ -0.57
SPG7-209ENST00000564047 PRRG3Q9BZD7 231 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 B3GAT1Q9P2W7 334 aa11.52□□□□□ -0.57
SPG7-209ENST00000564047 ZNF175Q9Y473 711 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms