RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 OMA1Q96E52 524 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 SPDL1Q96EA4 605 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 FBXO17Q96EF6 278 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 NEURL3Q96EH8 262 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 OTUB1Q96FW1 271 aaPredicted RBP4.07□□□□□ -1.76
SMG1-206ENST00000562668 ZC3HAV1LQ96H79 300 aaKnown RBP4.07□□□□□ -1.76
SMG1-206ENST00000562668 MAGED4Q96JG8 741 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 DUX3Q96PT4 197 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 OR7D2Q96RA2 312 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 OR52E6Q96RD3 313 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 GAL3ST4Q96RP7 486 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 CCT8L2Q96SF2 557 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 SECISBP2Q96T21 854 aaKnown RBP4.07□□□□□ -1.76
SMG1-206ENST00000562668 STACQ99469 402 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 UTP23Q9BRU9 249 aaKnown RBP4.07□□□□□ -1.76
SMG1-206ENST00000562668 ANGPTL4Q9BY76 406 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 PIGUQ9H490 435 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 ZCCHC3Q9NUD5 404 aaKnown RBP4.07□□□□□ -1.76
SMG1-206ENST00000562668 DDX18Q9NVP1 670 aaKnown RBP4.07□□□□□ -1.76
SMG1-206ENST00000562668 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.07□□□□□ -1.763e-6■□□□□ 10.6
SMG1-206ENST00000562668 CISD1Q9NZ45 108 aaKnown RBP4.07□□□□□ -1.76
SMG1-206ENST00000562668 CCDC167Q9P0B6 97 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 VAPAQ9P0L0 249 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 LUZP4Q9P127 313 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 TEKT2Q9UIF3 430 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 CFL2Q9Y281 166 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 PCDHGB5Q9Y5G0 923 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 PCNX3Q9H6A9 2034 aa4.07□□□□□ -1.76
SMG1-206ENST00000562668 DSPPQ9NZW4 1301 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 IGLV3-32A0A0A0MS00 114 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 TRAV17A0A0B4J275 112 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 TTC36A6NLP5 189 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 C16orf97H3BN30 126 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 NR5A2O00482 541 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 SLC22A2O15244 555 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 CFLARO15519 480 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 FCMRO60667 390 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 ICOSLGO75144 302 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 GCM2O75603 506 aaPredicted RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 SLC25A12O75746 678 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 FAM107AO95990 144 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 TFPTP0C1Z6 253 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 DDX5P17844 614 aaKnown RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 GPX2P18283 190 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 NCF2P19878 526 aaPredicted RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 GABRA3P34903 492 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 CASP3P42574 277 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 DNASE1L1P49184 302 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 CASP9P55211 416 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 STX1BP61266 288 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 PSPHP78330 225 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 ARG2P78540 354 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 MRPS22P82650 360 aaKnown RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 LRRC74AQ0VAA2 488 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 SELPLGQ14242 412 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 LASP1Q14847 261 aaKnown RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 INAQ16352 499 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 ARHGAP11BQ3KRB8 267 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 COQ5Q5HYK3 327 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.06□□□□□ -1.76
SMG1-206ENST00000562668 IRAK1BP1Q5VVH5 260 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 OPN5Q6U736 354 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 RTL4Q6ZR62 310 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 MOB3CQ70IA8 216 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 NUP54Q7Z3B4 507 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 GALNTL5Q7Z4T8 443 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 RNF130Q86XS8 419 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 DND1Q8IYX4 353 aaKnown RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 TAGAPQ8N103 731 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 CYP4Z2PQ8N1L4 340 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 CIARTQ8N365 385 aaPredicted RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 TMEM156Q8N614 296 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 WDSUB1Q8N9V3 476 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 POGLUT1Q8NBL1 392 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 OR2M7Q8NG81 312 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 FBXO30Q8TB52 745 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 SLC22A8Q8TCC7 542 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 GRHL3Q8TE85 626 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 TM9SF4Q92544 642 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 CDS1Q92903 461 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 RAB8BQ92930 207 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 EFHD2Q96C19 240 aaPredicted RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 ZNF524Q96C55 264 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 SNRNP40Q96DI7 357 aaKnown RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 AURKBQ96GD4 344 aaPredicted RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 ITCHQ96J02 903 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 SLC35G5Q96KT7 338 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 RILPQ96NA2 401 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 PANX1Q96RD7 426 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 SDF2Q99470 211 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 ZBTB18Q99592 522 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 SLX1AQ9BQ83 275 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 KLHDC3Q9BQ90 382 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 GPATCH1Q9BRR8 931 aaKnown RBP4.06□□□□□ -1.76
SMG1-206ENST00000562668 SLC35A5Q9BS91 424 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 OR51I1Q9H343 314 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 UBQLN3Q9H347 655 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 RABEP2Q9H5N1 569 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 TPT1P8Q9HAU6 139 aa4.06□□□□□ -1.76
SMG1-206ENST00000562668 IL1RL2Q9HB29 575 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms