RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 SGPP1Q9BX95 441 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 ACKR4Q9NPB9 350 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 MIEF1Q9NQG6 463 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 ZMIZ1Q9ULJ6 1067 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 GPR34Q9UPC5 381 aa12.85□□□□□ -0.35
GTF3C1-203ENST00000562609 A0A0G2JN53 185 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF879B4DU55 563 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 F5H0A9 414 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 HMGN4O00479 90 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SMAD9O15198 467 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF749O43361 778 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SLC34A2O95436 690 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 MRPL3P09001 348 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 POU2F2P09086 479 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 PYCR1P32322 319 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 MPIP34949 423 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 MNDAP41218 407 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 HTR5AP47898 357 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 CASP6P55212 293 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 OR12D2P58182 307 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 HYAL1Q12794 435 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 CHAF1BQ13112 559 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 PRAMEF14Q5SWL7 426 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 NXPE4Q6UWF7 544 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF813Q6ZN06 617 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ADCK2Q7Z695 626 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ARRDC1Q8N5I2 433 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 TEX19Q8NA77 164 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SMPDL3BQ92485 455 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 OSTF1Q92882 214 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 COX14Q96I36 57 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 HDAC8Q9BY41 377 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 IL21RQ9HBE5 538 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 MRPS30Q9NP92 439 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 DMRT3Q9NQL9 472 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 C5AR2Q9P296 337 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SNRNP200O75643 2136 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 A0A0A6YYC8 382 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 H7BY64 318 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 I3L1I5 382 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 CACNB4O00305 520 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 NARSO43776 548 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 OR2F2O95006 317 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 HOXC4P09017 264 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 RCC1P18754 421 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 IFNGR2P38484 337 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 BUD31P41223 144 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 CLDN12P56749 244 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 OR2F1Q13607 317 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 TMEM31Q5JXX7 168 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 NCMAPQ5T1S8 102 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 FAM71E1Q6IPT2 247 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 UNQ6126/PRO20091Q6UXV3 157 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 OR14C36Q8NHC7 312 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 NEURL3Q96EH8 262 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 PRAP1Q96NZ9 151 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SSX3Q99909 188 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 C17orf113A0A1B0GUU1 675 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 OR5H14A6NHG9 310 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 APODP05090 189 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 IL3P08700 152 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ALPPL2P10696 532 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 GPR4P46093 362 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SLC16A1P53985 500 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 F2RL1P55085 397 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SPCS3P61009 180 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 CLINT1Q14677 625 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 IRF4Q15306 451 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 TGIF1Q15583 401 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 FAM46CQ5VWP2 391 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 GLT8D1Q68CQ7 371 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 ZNF383Q8NA42 475 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 SLAMF9Q96A28 289 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 LINC00615Q96LM1 132 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 MACROD1Q9BQ69 325 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 CHST6Q9GZX3 395 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 TOLLIPQ9H0E2 274 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 DPEP2Q9H4A9 486 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 OPA3Q9H6K4 179 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 TAAR2Q9P1P5 351 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 TNFSF18Q9UNG2 199 aa12.84□□□□□ -0.35
GTF3C1-203ENST00000562609 C9orf170A2RU37 121 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 ANKRD61A6NGH8 418 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 OR52A4PA6NMU1 304 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 OR2AT4A6NND4 320 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 SLC31A1O15431 190 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 PPIHO43447 177 aaKnown RBP12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 KLHL18O94889 574 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 EPPINO95925 133 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 LAMP2P13473 410 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 CPT2P23786 658 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 POU3F4P49335 361 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 NRG3P56975 720 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 TAS2R41P59536 307 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 TAF13Q15543 124 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 NDUFAF6Q330K2 333 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 CDPF1Q6NVV7 123 aa12.83□□□□□ -0.36
GTF3C1-203ENST00000562609 C6orf120Q7Z4R8 191 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms