RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 C1orf174Q8IYL3 243 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 FAM76AQ8TAV0 307 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 SYNPRQ8TBG9 265 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 PHF21AQ96BD5 680 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 UPRTQ96BW1 309 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 FAM120BQ96EK7 910 aaKnown RBP8.05□□□□□ -1.12
HERC1-210ENST00000560897 MARS2Q96GW9 593 aaKnown RBP8.05□□□□□ -1.12
HERC1-210ENST00000560897 GPR78Q96P69 363 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 TXLNGYQ9BZA5 131 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 EGLN1Q9GZT9 426 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 PRDM13Q9H4Q3 707 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 KIF17Q9P2E2 1029 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 DCDC2Q9UHG0 476 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 ZNF225Q9UK10 706 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 FBXL3Q9UKT7 428 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 SLC35A3Q9Y2D2 325 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 STK38LQ9Y2H1 464 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 TMA7Q9Y2S6 64 aaKnown RBP8.05□□□□□ -1.12
HERC1-210ENST00000560897 TMED7Q9Y3B3 224 aa8.05□□□□□ -1.12
HERC1-210ENST00000560897 TMEM72A0PK05 275 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 ZNF503-AS2A6NEH8 195 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 A8MXK9 166 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 ZNF99A8MXY4 864 aaPredicted RBP8.04□□□□□ -1.12
HERC1-210ENST00000560897 TMEM229AB2RXF0 380 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 RPL36A-HNRNPH2H7BZ11 118 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 COPEO14579 308 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 GPR137BO60478 399 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 SLC43A1O75387 559 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 SUPT7LO94864 414 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 HLA-HP01893 362 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 SHBGP04278 402 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 ENO1P06733 434 aaKnown RBP8.04□□□□□ -1.12
HERC1-210ENST00000560897 MELTFP08582 738 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 SBK2P0C263 348 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 TAC1P20366 129 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 MAP2K6P52564 334 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 BPIFB3P59826 476 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 PIGFQ07326 219 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 PDE7AQ13946 482 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 CEACAM7Q14002 265 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 CEACAM16Q2WEN9 425 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 EXOSC6Q5RKV6 272 aaKnown RBP8.04□□□□□ -1.12
HERC1-210ENST00000560897 DHRS7BQ6IAN0 325 aaPredicted RBP8.04□□□□□ -1.12
HERC1-210ENST00000560897 GDPGP1Q6ZNW5 385 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 CREB3L2Q70SY1 520 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 OR4S1Q8NGB4 309 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 OR56A1Q8NGH5 318 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 ACMSDQ8TDX5 336 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 EPS8L3Q8TE67 593 aaKnown RBP8.04□□□□□ -1.12
HERC1-210ENST00000560897 ZIM3Q96PE6 472 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 ZNF382Q96SR6 550 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 NANOGQ9H9S0 305 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 PATZ1Q9HBE1 687 aaKnown RBP8.04□□□□□ -1.12
HERC1-210ENST00000560897 NPHS2Q9NP85 383 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 KCNK9Q9NPC2 374 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 ADPRHL2Q9NX46 363 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 PCDHGB5Q9Y5G0 923 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 NPTNQ9Y639 398 aa8.04□□□□□ -1.12
HERC1-210ENST00000560897 COL7A1Q02388 2944 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 DNAH3Q8TD57 4116 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 H0YL77 283 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 AKAP10O43572 662 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 AKAP8O43823 692 aaKnown RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 STX11O75558 287 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 PPP1R3DO95685 299 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 CLPTM1O96005 669 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 AK1P00568 194 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 LCKP06239 509 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 CHRM4P08173 479 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 OR8G3PP0DMU2 310 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 UQCRBP14927 111 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 ZNF14P17017 642 aaPredicted RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 KRT4P19013 534 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 MAKP20794 623 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 CD80P33681 288 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 IDH2P48735 452 aaKnown RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 ZNF81P51508 661 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 GNB2P62879 340 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 EGR3Q06889 387 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 DBPQ10586 325 aaPredicted RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 CAMK2DQ13557 499 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 HERPUD1Q15011 391 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 ZNF141Q15928 474 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 TIFABQ6ZNK6 161 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 ARFGAP2Q8N6H7 521 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 ICA1LQ8NDH6 482 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 C11orf40Q8WZ69 217 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 NEURL3Q96EH8 262 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 THOC1Q96FV9 657 aaKnown RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 ZNF764Q96H86 408 aaPredicted RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 TSPAN32Q96QS1 320 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 DCLRE1CQ96SD1 692 aaKnown RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 DENND2DQ9H6A0 471 aaPredicted RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 REEP4Q9H6H4 257 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 VIPAS39Q9H9C1 493 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 GPR35Q9HC97 309 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 PLA2G2EQ9NZK7 142 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.03□□□□□ -1.12
HERC1-210ENST00000560897 EGFL7Q9UHF1 273 aa8.03□□□□□ -1.12
HERC1-210ENST00000560897 RASD1Q9Y272 281 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms