RNA–Protein interactions for RNA: ENST00000559941.1

CHRNA3-207, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-207ENST00000559941 SWI5Q1ZZU3 235 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 VMACQ2NL98 169 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 MST1LQ2TV78 715 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 ENTPD8Q5MY95 495 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 PHYHD1Q5SRE7 291 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 NANOGP8Q6NSW7 305 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 CLEC2AQ6UVW9 174 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 CCDC80Q76M96 950 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 RBM45Q8IUH3 476 aaKnown RBP17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 C20orf196Q8IYI0 205 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 OR4D11Q8NGI4 311 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 TAMM41Q96BW9 452 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 EMC6Q9BV81 110 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 NANOGQ9H9S0 305 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 MRGBPQ9NV56 204 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 NOX1Q9Y5S8 564 aa17.8■□□□□ 0.44
CHRNA3-207ENST00000559941 SLC35F4A4IF30 521 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 CPSF4LA6NMK7 179 aaKnown RBP17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 ZNF99A8MXY4 864 aaPredicted RBP17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 PLPP3O14495 311 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 LYPD3O95274 346 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 THY1P04216 161 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 CECR9P0C854 216 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 TROVE2P10155 538 aaKnown RBP eCLIP17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 CBR1P16152 277 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 POU3F1Q03052 451 aaPredicted RBP17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 PXKQ7Z7A4 578 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 CCDC36Q8IYA8 594 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 C10orf53Q8N6V4 93 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 OR5J2Q8NH18 312 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 SLC26A7Q8TE54 656 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 ADAMTS16Q8TE57 1224 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 RASSF5Q8WWW0 418 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 HTRA1Q92743 480 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 FBXO17Q96EF6 278 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 TXNDC15Q96J42 360 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 SH3GL1Q99961 368 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 CA10Q9NS85 328 aa17.79■□□□□ 0.44
CHRNA3-207ENST00000559941 M0R3G1 203 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 TP53P04637 393 aaPredicted RBP17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 EFNA4P52798 201 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 ARFIP2P53365 341 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 CRYBA2P53672 197 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 COQ5Q5HYK3 327 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 CARD17Q5XLA6 110 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 WDR88Q6ZMY6 472 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 CALHM3Q86XJ0 350 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 PRIMA1Q86XR5 153 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 VANGL1Q8TAA9 524 aaPredicted RBP17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 LRRC58Q96CX6 371 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 PCDHAC1Q9H158 963 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 SEC61A2Q9H9S3 476 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 MED29Q9NX70 200 aa17.78■□□□□ 0.44
CHRNA3-207ENST00000559941 A0A096LNT2 108 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 TRAPPC13A5PLN9 417 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 ZNF503-AS2A6NEH8 195 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 FXYD1O00168 92 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 PDE5AO76074 875 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 NPPAP01160 153 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 AHCYP23526 432 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 CALCRP30988 508 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 ARR3P36575 388 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 KLF10Q13118 480 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 RABL3Q5HYI8 236 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 CGB2Q6NT52 195 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 TTC33Q6PID6 262 aaPredicted RBP17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 TSPYL5Q86VY4 417 aaPredicted RBP17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 WDFY1Q8IWB7 410 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 ZNF525Q8N782 197 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 OR4F15Q8NGB8 312 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 OR8J3Q8NGG0 315 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 MPP4Q96JB8 637 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 B3GAT2Q9NPZ5 323 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 FGFR1OP2Q9NVK5 253 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 SLC7A7Q9UM01 511 aa17.77■□□□□ 0.44
CHRNA3-207ENST00000559941 ZNF726A6NNF4 738 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 CD5LO43866 347 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 CRLF1O75462 422 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 F12P00748 615 aaPredicted RBP17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 CELA3BP08861 270 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 ADORA3P0DMS8 318 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 SLC25A16P16260 332 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 SERPINF1P36955 418 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 CAMK2DQ13557 499 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 ZNF74Q16587 644 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 MMEL1Q495T6 779 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 ZNF627Q7L945 461 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 MYPOPQ86VE0 399 aaPredicted RBP17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 NUP37Q8NFH4 326 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 FAM168AQ92567 244 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 ECSITQ9BQ95 431 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 ZNF426Q9BUY5 554 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 SAR1AQ9NR31 198 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 USP22Q9UPT9 525 aa17.76■□□□□ 0.43
CHRNA3-207ENST00000559941 BBIP1A8MTZ0 92 aa17.75■□□□□ 0.43
CHRNA3-207ENST00000559941 B9A039 149 aa17.75■□□□□ 0.43
CHRNA3-207ENST00000559941 MRASO14807 208 aa17.75■□□□□ 0.43
CHRNA3-207ENST00000559941 TLX2O43763 284 aaPredicted RBP17.75■□□□□ 0.43
CHRNA3-207ENST00000559941 SEC14L2O76054 403 aa17.75■□□□□ 0.43
CHRNA3-207ENST00000559941 OR6A2O95222 327 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms