RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 BCAP31P51572 246 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 HNRNPA3P51991 378 aaKnown RBP2.45□□□□□ -2.02
TRAV28-201ENST00000557548 XIAPP98170 497 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 DR1Q01658 176 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 IRF8Q02556 426 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 PAX2Q02962 417 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 CHRNB3Q05901 458 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 RUNX3Q13761 415 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 QRICH1Q2TAL8 776 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF829Q3KNS6 432 aaPredicted RBP2.45□□□□□ -2.02
TRAV28-201ENST00000557548 CCDC14Q49A88 953 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 SAMD4BQ5PRF9 694 aaKnown RBP2.45□□□□□ -2.02
TRAV28-201ENST00000557548 LY6G6FQ5SQ64 297 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 SPECC1LQ69YQ0 1117 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 CLEC6AQ6EIG7 209 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 TWF2Q6IBS0 349 aaKnown RBP2.45□□□□□ -2.02
TRAV28-201ENST00000557548 OR5M10Q6IEU7 315 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 Q6ZSR3 168 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 TPGS1Q6ZTW0 290 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 STXBP4Q6ZWJ1 553 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 SLC25A42Q86VD7 318 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 VRK2Q86Y07 508 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 HIPK1Q86Z02 1210 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 PQLC3Q8N755 202 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 OR4K14Q8NGD5 310 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 OR4A4PQ8NGN8 299 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 OR13F1Q8NGS4 319 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 OR2A12Q8NGT7 310 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 ANGPTL6Q8NI99 470 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 GPR151Q8TDV0 419 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 GPX8Q8TED1 209 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 GLYATL2Q8WU03 294 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 SEC22AQ96IW7 307 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 RANBP9Q96S59 729 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 SLC29A1Q99808 456 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 TSG101Q99816 390 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 MRPL45Q9BRJ2 306 aaKnown RBP2.45□□□□□ -2.02
TRAV28-201ENST00000557548 TRIM51Q9BSJ1 452 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 RNF126Q9BV68 326 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 OSBPL10Q9BXB5 764 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 BBS2Q9BXC9 721 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 FRMD8P1Q9BZ68 369 aaPredicted RBP2.45□□□□□ -2.02
TRAV28-201ENST00000557548 ELOVL6Q9H5J4 265 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 LRRC19Q9H756 370 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 PANK3Q9H999 370 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 UCK1Q9HA47 277 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 UGT1A10Q9HAW8 530 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 CCNB1IP1Q9NPC3 277 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 SENP1Q9P0U3 644 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 OR1A1Q9P1Q5 309 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 CTSFQ9UBX1 484 aa2.45□□□□□ -2.02
TRAV28-201ENST00000557548 TOP2AP11388 1531 aaKnown RBP2.45□□□□□ -2.02
TRAV28-201ENST00000557548 EVC2Q86UK5 1308 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ARHGEF11O15085 1522 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 TSPOAP1O95153 1857 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 NSG1A0A0A6YYJ2 146 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 A0A1W2PPV4 95 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 H7C423 109 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 PHF1O43189 567 aaPredicted RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GALR3O60755 368 aaPredicted RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 SH3BGRLO75368 114 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 SNAI1O95863 264 aaPredicted RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 LALBAP00709 142 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GLAP06280 429 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 CLTAP09496 248 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GATA1P15976 413 aaPredicted RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 EIF2S2P20042 333 aaKnown RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ATP6V1B2P21281 511 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 STOMP27105 288 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 DCKP27707 260 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 PRDX3P30048 256 aaKnown RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 VHLP40337 213 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 NSG1P42857 185 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 KIR2DS2P43631 304 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GPR4P46093 362 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 YAP1P46937 504 aaKnown RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 UQCRFS1P47985 274 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GPM6AP51674 278 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 RAB10P61026 200 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MS4A2Q01362 244 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 PAX5Q02548 391 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 SELENBP1Q13228 472 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GPR176Q14439 515 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ITIH4Q14624 930 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GNMTQ14749 295 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 TGIF1Q15583 401 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ZSCAN26Q16670 478 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 NSUN5P1Q3KNT7 163 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ZC2HC1BQ5TFG8 222 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 C9orf135Q5VTT2 229 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MLIPQ5VWP3 458 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 CXCL17Q6UXB2 119 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF836Q6ZNA1 936 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 SLC25A48Q6ZT89 311 aaKnown RBP2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ACOT7LQ6ZUV0 252 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 GPRIN3Q6ZVF9 776 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 SLC16A14Q7RTX9 510 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 LINC00523Q86TU6 105 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 ZNF329Q86UD4 541 aa2.44□□□□□ -2.02
TRAV28-201ENST00000557548 MFSD6LQ8IWD5 586 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms