RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CD163Q86VB7 1156 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 LRRC75AQ8NAA5 344 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 OR9K2Q8NGE7 335 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 OR8J1Q8NGP2 316 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 WNT2BQ93097 391 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF845Q96IR2 970 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-210ENST00000553950 ERMAPQ96PL5 475 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-210ENST00000553950 TM9SF2Q99805 663 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 CMC2Q9NRP2 79 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 B3GAT1Q9P2W7 334 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 SEC14L4Q9UDX3 406 aa12.95□□□□□ -0.34
SHMT2-210ENST00000553950 SHANK1Q9Y566 2161 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 OR6C65A6NJZ3 312 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 SNTNA6NMZ2 147 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF724A8MTY0 619 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 MS4A18H0YCH9 400 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 PLGP00747 810 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-210ENST00000553950 F13BP05160 661 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 PCYT1AP49585 367 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 TOP3AQ13472 1001 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-210ENST00000553950 MED21Q13503 144 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 SNAPC1Q16533 368 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 ACKR1Q16570 336 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 MS4A18Q3C1V0 323 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 C6orf52Q5T4I8 152 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 EEF1A1P5Q5VTE0 462 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 NSUN5P2Q63ZY6 315 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 Q6ZPB1 254 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-210ENST00000553950 SLC35D2Q76EJ3 337 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 FAM122BQ7Z309 247 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 IGFN1Q86VF2 1251 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 ARIH2OSQ8N7S6 290 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 OR4Q3Q8NH05 313 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 FNDC9Q8TBE3 224 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 RELTQ969Z4 430 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 TMEM45BQ96B21 275 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 GMPPAQ96IJ6 420 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-210ENST00000553950 TRIB1Q96RU8 372 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 BCO1Q9HAY6 547 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 PNPLA3Q9NST1 481 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 KLHL13Q9P2N7 655 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 IER3IP1Q9Y5U9 82 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 ATMQ13315 3056 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 BSNQ9UPA5 3926 aa12.94□□□□□ -0.34
SHMT2-210ENST00000553950 IGHV3-15A0A0B4J1V0 119 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 TEX13CA0A0J9YWL9 993 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF726A6NNF4 738 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 SURF4O15260 269 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 DENRO43583 198 aaKnown RBP12.93□□□□□ -0.34
SHMT2-210ENST00000553950 TRAF3IP2O43734 574 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-210ENST00000553950 SLC19A2O60779 497 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 SERPINI2O75830 405 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 RENP00797 406 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 IGHG1P01857 330 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 CRHP06850 196 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 MYF6P23409 242 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ACVR2AP27037 513 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ERVK-25P63136 954 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 IL5RAQ01344 420 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ITGADQ13349 1161 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 PRR30Q53SZ7 412 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-210ENST00000553950 MEDAGQ5VYS4 303 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF585AQ6P3V2 769 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 DNM1P34Q6PK57 102 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 USP51Q70EK9 711 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 MED12LQ86YW9 2145 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 GID4Q8IVV7 300 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 IQCF1Q8N6M8 205 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 OR5M9Q8NGP3 310 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 OR6X1Q8NH79 312 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF519Q8TB69 540 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ASB10Q8WXI3 467 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 Q96MT0 163 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 TSPAN32Q96QS1 320 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ALG12Q9BV10 488 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 PARPBPQ9NWS1 579 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 TVP23BQ9NYZ1 205 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 TNFRSF10DQ9UBN6 386 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 IL20RAQ9UHF4 553 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 LRCH1Q9Y2L9 728 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF835Q9Y2P0 537 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 EMC9Q9Y3B6 208 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 ADAM18Q9Y3Q7 739 aa12.93□□□□□ -0.34
SHMT2-210ENST00000553950 DSPP15924 2871 aaKnown RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 MBD3L4A6NDZ8 208 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 MBD3L3A6NE82 208 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 MBD3L5A6NJ08 208 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF716A6NP11 495 aa12.92□□□□□ -0.34
SHMT2-210ENST00000553950 ZNF814B7Z6K7 855 aa12.92□□□□□ -0.34
SHMT2-210ENST00000553950 SS18L1O75177 396 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 IGFBP1P08833 259 aaPredicted RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 IFNGR1P15260 489 aa12.92□□□□□ -0.34
SHMT2-210ENST00000553950 EPHA2P29317 976 aa12.92□□□□□ -0.34
SHMT2-210ENST00000553950 POLR2IP36954 125 aaKnown RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 SNRPGP62308 76 aaKnown RBP12.92□□□□□ -0.34
SHMT2-210ENST00000553950 TMEM201Q5SNT2 666 aa12.92□□□□□ -0.34
SHMT2-210ENST00000553950 B3GNT6Q6ZMB0 384 aa12.92□□□□□ -0.34
SHMT2-210ENST00000553950 PTCHD4Q6ZW05 846 aa12.92□□□□□ -0.34
SHMT2-210ENST00000553950 CREB3L2Q70SY1 520 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms