RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 ERVK-19Q9WJR5 959 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 SIRT4Q9Y6E7 314 aaPredicted RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 ZNF780BQ9Y6R6 833 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 ARHGEF17Q96PE2 2063 aaPredicted RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 OR6C74A6NCV1 312 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 MCIDASD6RGH6 385 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 LINC01387J3KSC0 135 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 KLF4O43474 513 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 EIF4E2O60573 245 aaKnown RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 EIF1BO60739 113 aaKnown RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 SPDEFO95238 335 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 UCHL1P09936 223 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 SLC35G6P0C7Q6 338 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 GNSP15586 552 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 NT5EP21589 574 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 MST1P26927 711 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 EIF1P41567 113 aaKnown RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 E2F1Q01094 437 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 ZP2Q05996 745 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 RNF212Q495C1 297 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 LPCAT3Q6P1A2 487 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 FIGLAQ6QHK4 219 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 LDLRAD3Q86YD5 345 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 CPOQ8IVL8 374 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 CMTM4Q8IZR5 234 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 DEFB123Q8N688 67 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 BMPERQ8N8U9 685 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 NUP43Q8NFH3 380 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 GPBAR1Q8TDU6 330 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 ZFPM2Q8WW38 1151 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 PATE1Q8WXA2 126 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 SLC39A7Q92504 469 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 MRPL48Q96GC5 212 aaKnown RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 OR7D2Q96RA2 312 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 ARHGDIGQ99819 225 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 GINS4Q9BRT9 223 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 IER2Q9BTL4 223 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 ALX4Q9H161 411 aaPredicted RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 ZNF768Q9H5H4 540 aaKnown RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 C6orf106Q9H6K1 298 aaPredicted RBP10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 AUNIPQ9H7T9 357 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 NRIP3Q9NQ35 241 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 GSN-AS1Q9NRJ2 163 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 CALML5Q9NZT1 146 aa10.1□□□□□ -0.79
TUBA1C-209ENST00000552448 TRAV20A0A0B4J274 112 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 CALCBP10092 127 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 SCAND1P57086 179 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 TNFRSF17Q02223 184 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 SLC3A1Q07837 685 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 GAS6Q14393 721 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 NDUFAF6Q330K2 333 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 CDNFQ49AH0 187 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 PAN3Q58A45 887 aaKnown RBP10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 CLEC12AQ5QGZ9 265 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 C5orf46Q6UWT4 87 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 MBOAT2Q6ZWT7 520 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 SLC36A1Q7Z2H8 476 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 HMGN2P46Q86SG4 172 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 PUSL1Q8N0Z8 303 aaKnown RBP10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 SPEM1Q8N4L4 309 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 KCNRGQ8N5I3 272 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 TMEM185AQ8NFB2 350 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 CADM4Q8NFZ8 388 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 OR52I2Q8NH67 350 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 OR10G6Q8NH81 332 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 THAP6Q8TBB0 222 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 CCDC107Q8WV48 283 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 PGLYRP3Q96LB9 341 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 SERINC2Q96SA4 455 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 DMRTA2Q96SC8 542 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 TIMP4Q99727 224 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 TCEAL2Q9H3H9 227 aaPredicted RBP10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 HINT3Q9NQE9 182 aaKnown RBP10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 GPR27Q9NS67 375 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 C14orf105Q9NVL8 296 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 KLHL28Q9NXS3 571 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 HAO2Q9NYQ3 351 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 ZNF629Q9UEG4 869 aaPredicted RBP10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 ETV7Q9Y603 341 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 SCN3AQ9NY46 2000 aa10.09□□□□□ -0.79
TUBA1C-209ENST00000552448 A0A1W2PPC4 97 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 FAM86C2PA6NEL3 165 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 DVL2O14641 736 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 OGG1O15527 345 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 GPRIN2O60269 458 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 DNAJB6O75190 326 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 EIF3GO75821 320 aaKnown RBP eCLIP10.08□□□□□ -0.81e-13■■□□□ 14.1
TUBA1C-209ENST00000552448 TNFP01375 233 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 CSF1P09603 554 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 ZNF806P0C7X5 589 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 ZNF35P13682 527 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 ANXA7P20073 488 aaKnown RBP10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 BUD31P41223 144 aaPredicted RBP10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 LSSP48449 732 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 BLKP51451 505 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 ACTA2P62736 377 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 ACTG2P63267 376 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 UBE2IP63279 158 aaKnown RBP10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 RUNX2Q13950 521 aa10.08□□□□□ -0.8
TUBA1C-209ENST00000552448 LINC00303Q3SY05 128 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms