RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 CLEC4FQ8N1N0 589 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 CPEB3Q8NE35 698 aaKnown RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 DEFB108BQ8NET1 73 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 KIF18AQ8NI77 898 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 SYNPRQ8TBG9 265 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 STK35Q8TDR2 534 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 TWIST2Q8WVJ9 160 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 TRIM44Q96DX7 344 aaPredicted RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 ELMOD3Q96FG2 381 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF75AQ96N20 296 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 FMO2Q99518 471 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 CITED1Q99966 193 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 MRI1Q9BV20 369 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 B3GAT2Q9NPZ5 323 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 PURGQ9UJV8 347 aaKnown RBP13□□□□□ -0.33
CACNB3-220ENST00000551716 POFUT2Q9Y2G5 429 aa13□□□□□ -0.33
CACNB3-220ENST00000551716 LOC102725191A0A1B0GVB3 256 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 UBL3O95164 117 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 DBIP07108 87 aaKnown RBP12.99□□□□□ -0.33
CACNB3-220ENST00000551716 ABHD2P08910 425 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 PNMTP11086 282 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF250P15622 560 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 GCAP28676 217 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 GIPRP48546 466 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 TXNL4AP83876 142 aaKnown RBP12.99□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF154Q13106 437 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 CAMK2DQ13557 499 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 BRICD5Q6PL45 260 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 SYT10Q6XYQ8 523 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF813Q6ZN06 617 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 USP51Q70EK9 711 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 HMGN2P46Q86SG4 172 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 KDM8Q8N371 416 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 CCDC63Q8NA47 563 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 FNDC5Q8NAU1 212 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 VPS37AQ8NEZ2 397 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 OR4A15Q8NGL6 344 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 C11orf40Q8WZ69 217 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 SLC25A36Q96CQ1 311 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 LRR1Q96L50 414 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF48Q96MX3 618 aaPredicted RBP12.99□□□□□ -0.33
CACNB3-220ENST00000551716 SAP30LQ9HAJ7 183 aa12.99□□□□□ -0.33
CACNB3-220ENST00000551716 IGLV3-9A0A075B6K5 115 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 M0R3G1 203 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 PLIN3O60664 434 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 NPIPB7O75200 414 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 ENTPD5O75356 428 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 SERPINA5P05154 406 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 OMGP23515 440 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 ANXA11P50995 505 aaKnown RBP12.98□□□□□ -0.33
CACNB3-220ENST00000551716 CLDN8P56748 225 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 FUT5Q11128 374 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 BNIP2Q12982 314 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 ALKBH6Q3KRA9 238 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 UGT3A2Q3SY77 523 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 KLF17Q5JT82 389 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-220ENST00000551716 C6orf136Q5SQH8 315 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 MRPL2Q5T653 305 aaKnown RBP12.98□□□□□ -0.33
CACNB3-220ENST00000551716 OLFML2AQ68BL7 652 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 LRRC74BQ6ZQY2 392 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 ZCCHC23Q6ZST2 131 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF572Q7Z3I7 529 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-220ENST00000551716 CLECL1Q8IZS7 167 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 CADM2Q8N3J6 435 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 KIR3DL3Q8N743 410 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF519Q8TB69 540 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 OR2M2Q96R28 347 aa12.98□□□□□ -0.33
CACNB3-220ENST00000551716 LEF1Q9UJU2 399 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-220ENST00000551716 POLR3KQ9Y2Y1 108 aaPredicted RBP12.98□□□□□ -0.33
CACNB3-220ENST00000551716 PRSS51A0A1B0GVH4 220 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 FTCDNL1E5RQL4 147 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 OR2T1O43869 369 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 SEC14L2O76054 403 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 CRHR1P34998 444 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 CHI3L1P36222 383 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-220ENST00000551716 SRSF4Q08170 494 aaKnown RBP12.97□□□□□ -0.33
CACNB3-220ENST00000551716 MAD2L1Q13257 205 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-220ENST00000551716 ANXA8L1Q5VT79 327 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 C9orf139Q6ZV77 190 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 PEX5LQ8IYB4 626 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 C20orf196Q8IYI0 205 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 TMEM123Q8N131 208 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 OR8J2Q8NGG1 315 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 IFT81Q8WYA0 676 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 CCL17Q92583 94 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 NEURL3Q96EH8 262 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 RBM4BQ9BQ04 359 aaKnown RBP12.97□□□□□ -0.33
CACNB3-220ENST00000551716 C1orf50Q9BV19 199 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 MECRQ9BV79 373 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.97□□□□□ -0.33
CACNB3-220ENST00000551716 UBAP1Q9NZ09 502 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 PSMC3IPQ9P2W1 217 aaPredicted RBP12.97□□□□□ -0.33
CACNB3-220ENST00000551716 GPR45Q9Y5Y3 372 aa12.97□□□□□ -0.33
CACNB3-220ENST00000551716 ISPDA4D126 451 aa12.96□□□□□ -0.33
CACNB3-220ENST00000551716 AIM2O14862 343 aa12.96□□□□□ -0.33
CACNB3-220ENST00000551716 TRIM13O60858 407 aa12.96□□□□□ -0.33
CACNB3-220ENST00000551716 CLPTM1O96005 669 aa12.96□□□□□ -0.33
CACNB3-220ENST00000551716 IGHMP01871 453 aa12.96□□□□□ -0.33
CACNB3-220ENST00000551716 ZNF12P17014 697 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms