RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 SPATA9Q9BWV2 254 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 CENPHQ9H3R5 247 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 RAD21L1Q9H4I0 556 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 RMND5AQ9H871 391 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 MEAF6Q9HAF1 191 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 TMBIM4Q9HC24 238 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 CRLF2Q9HC73 371 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 GPR35Q9HC97 309 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 PNPOQ9NVS9 261 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 RCE1Q9Y256 329 aa7.32□□□□□ -1.24
TROAP-208ENST00000548817 ZNF443Q9Y2A4 671 aaPredicted RBP7.32□□□□□ -1.24
TROAP-208ENST00000548817 RRP15Q9Y3B9 282 aaKnown RBP7.32□□□□□ -1.24
TROAP-208ENST00000548817 IGHV2OR16-5A0A0B4J2B6 119 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 RPL36A-HNRNPH2H7BZ11 118 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 SLC22A3O75751 556 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 RGS9O75916 674 aaPredicted RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 ZNF432O94892 652 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 IGKV3-15P01624 115 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 IGLV1-44P01699 117 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 PNMTP11086 282 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 CD79AP11912 226 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 ETFAP13804 333 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 NQO1P15559 274 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 BGNP21810 368 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 GCH1P30793 250 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 IL2RGP31785 369 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 CDKN2CP42773 168 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 GPR6P46095 362 aaPredicted RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 RPS23P62266 143 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 UBA52P62987 128 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 IL13RA1P78552 427 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 GALK2Q01415 458 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 HGFACQ04756 655 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 SNTB2Q13425 540 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 MFSD13AQ14CX5 517 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 CEACAM16Q2WEN9 425 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 KRT80Q6KB66 452 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 OGFOD2Q6N063 350 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 C5orf46Q6UWT4 87 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 H1FNTQ75WM6 255 aaPredicted RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 NET1Q7Z628 596 aaPredicted RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 MDP1Q86V88 176 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 ZCCHC24Q8N2G6 241 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 CLIP4Q8N3C7 705 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 ZDHHC22Q8N966 263 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 SYT14Q8NB59 555 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 RNF217Q8TC41 542 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 SLC38A4Q969I6 547 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 TMEM186Q96B77 213 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 ITCHQ96J02 903 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 TMEM109Q9BVC6 243 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 MS4A5Q9H3V2 200 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 UNKLQ9H9P5 680 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 ZMAT3Q9HA38 289 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 TPT1P8Q9HAU6 139 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 SSU72Q9NP77 194 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 DDX28Q9NUL7 540 aaKnown RBP7.31□□□□□ -1.24
TROAP-208ENST00000548817 AIG1Q9NVV5 245 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 REV1Q9UBZ9 1251 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 POFUT2Q9Y2G5 429 aa7.31□□□□□ -1.24
TROAP-208ENST00000548817 ZNF726A6NNF4 738 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 ZNF99A8MXY4 864 aaPredicted RBP7.3□□□□□ -1.24
TROAP-208ENST00000548817 TMEM229AB2RXF0 380 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 C3orf80F5H4A9 247 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 M0R233 179 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 M0R3G1 203 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 SYNGR3O43761 229 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 NPIPB7O75200 414 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 BCL10O95999 233 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 C1QCP02747 245 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 CELA3BP08861 270 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 PRG2P13727 222 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 IDO1P14902 403 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 NR4A1P22736 598 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 ZFP36P26651 326 aaKnown RBP7.3□□□□□ -1.24
TROAP-208ENST00000548817 MDH1P40925 334 aaKnown RBP7.3□□□□□ -1.24
TROAP-208ENST00000548817 EVX1P49640 407 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 P2RY4P51582 365 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 SELENOVP59797 346 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 NCALDP61601 193 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 CCNIQ14094 377 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 SLC9B1Q4ZJI4 515 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 C6orf10Q5SRN2 563 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 LINGO2Q7L985 606 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 SERPINA11Q86U17 422 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 UEVLDQ8IX04 471 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 OR6N1Q8NGY5 312 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 SLC38A5Q8WUX1 472 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 DNAJA4Q8WW22 397 aaPredicted RBP7.3□□□□□ -1.24
TROAP-208ENST00000548817 SLC35B4Q969S0 331 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 TMEM19Q96HH6 336 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 TEX37Q96LM6 180 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 SORT1Q99523 831 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 EPYCQ99645 322 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 ASPNQ9BXN1 380 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 C20orf27Q9GZN8 174 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 NSRP1Q9H0G5 558 aaKnown RBP7.3□□□□□ -1.24
TROAP-208ENST00000548817 MMP27Q9H306 513 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 TPK1Q9H3S4 243 aa7.3□□□□□ -1.24
TROAP-208ENST00000548817 SEC61A2Q9H9S3 476 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms