RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 OR4D11Q8NGI4 311 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 ANKRD27Q96NW4 1050 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 FOXN4Q96NZ1 517 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 MCHR1Q99705 422 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 ARHGDIGQ99819 225 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 VRK1Q99986 396 aaPredicted RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 PLK3Q9H4B4 646 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 NOX3Q9HBY0 568 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 LEF1Q9UJU2 399 aaPredicted RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 NDUFAF1Q9Y375 327 aa11.57□□□□□ -0.56
CPSF6-204ENST00000547486 HEATR1Q9H583 2144 aaKnown RBP11.57□□□□□ -0.56
CPSF6-204ENST00000547486 TMEM129A0AVI4 362 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 SLC35F4A4IF30 521 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF99A8MXY4 864 aaPredicted RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 B9A039 149 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 PLPP3O14495 311 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 HLA-HP01893 362 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 OPN1SWP03999 348 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 IGFBP1P08833 259 aaPredicted RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 NCALDP61601 193 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 SNRPD2P62316 118 aaKnown RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 POU3F1Q03052 451 aaPredicted RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 CHD3Q12873 2000 aaKnown RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 PMS2P3Q13401 168 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 DHDDSQ86SQ9 333 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 TSPYL5Q86VY4 417 aaPredicted RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 DPP10Q8N608 796 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 SCAIQ8N9R8 606 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 C11orf65Q8NCR3 313 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 NUP37Q8NFH4 326 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 BHLHE22Q8NFJ8 381 aaPredicted RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 OR4F15Q8NGB8 312 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 OR6T1Q8NGN1 323 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 MAGEB18Q96M61 343 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF75AQ96N20 296 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 EPYCQ99645 322 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 CGREF1Q99674 301 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 DOK1Q99704 481 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 TMEM43Q9BTV4 400 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 ASPNQ9BXN1 380 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 RABEP2Q9H5N1 569 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 B3GNT2Q9NY97 397 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 MRPL39Q9NYK5 338 aaKnown RBP11.56□□□□□ -0.56
CPSF6-204ENST00000547486 SELENONQ9NZV5 590 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 SLC13A4Q9UKG4 626 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 ANGPT4Q9Y264 503 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 CORINQ9Y5Q5 1042 aa11.56□□□□□ -0.56
CPSF6-204ENST00000547486 IGHV2OR16-5A0A0B4J2B6 119 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 PDE5AO76074 875 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 CSF3P09919 207 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 AHCYP23526 432 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 ARR3P36575 388 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 NR4A2P43354 598 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 PDLIM4P50479 330 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 GZMMP51124 257 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 CRYBA2P53672 197 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
CPSF6-204ENST00000547486 PIGFQ07326 219 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 PUDPQ08623 228 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 NPRL3Q12980 569 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 CAMK2DQ13557 499 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 MFSD13AQ14CX5 517 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 CYP51A1Q16850 503 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 CHRFAM7AQ494W8 412 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 ENTPD8Q5MY95 495 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 CYB5R2Q6BCY4 276 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 SLC46A3Q7Z3Q1 461 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 RANBP3LQ86VV4 465 aaPredicted RBP11.55□□□□□ -0.56
CPSF6-204ENST00000547486 C10orf53Q8N6V4 93 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 ARIH2OSQ8N7S6 290 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 STON2Q8WXE9 905 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 LRR1Q96L50 414 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 KCNK17Q96T54 332 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 KAT8Q9H7Z6 458 aaKnown RBP11.55□□□□□ -0.56
CPSF6-204ENST00000547486 NPHS2Q9NP85 383 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 NOX1Q9Y5S8 564 aa11.55□□□□□ -0.56
CPSF6-204ENST00000547486 ARFGEF3Q5TH69 2177 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 ATRQ13535 2644 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 IGHV4-61A0A0C4DH41 118 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 CPSF4LA6NMK7 179 aaKnown RBP11.54□□□□□ -0.56
CPSF6-204ENST00000547486 HMGB1P1B2RPK0 211 aaPredicted RBP11.54□□□□□ -0.56
CPSF6-204ENST00000547486 hCG_2039718K7EN88 272 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 FBP2O00757 339 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 AKAP8O43823 692 aaKnown RBP11.54□□□□□ -0.56
CPSF6-204ENST00000547486 FMO6PO60774 539 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 EDF1O60869 148 aaKnown RBP11.54□□□□□ -0.56
CPSF6-204ENST00000547486 SERPINI2O75830 405 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 C8BP07358 591 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 CD247P20963 164 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 CAPZA2P47755 286 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 RBBP4Q09028 425 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 GGTLC2Q14390 218 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 CARTPTQ16568 116 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 MSMPQ1L6U9 139 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 SWT1Q5T5J6 900 aaKnown RBP11.54□□□□□ -0.56
CPSF6-204ENST00000547486 PODNL1Q6PEZ8 512 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF613Q6PF04 617 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 ZNF627Q7L945 461 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 PXKQ7Z7A4 578 aa11.54□□□□□ -0.56
CPSF6-204ENST00000547486 SVOPLQ8N434 492 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms