RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 HYAL4Q2M3T9 481 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 SLC35D3Q5M8T2 416 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 FAM69AQ5T7M9 428 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 TMPRSS12Q86WS5 348 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 OR5AK2Q8NH90 309 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 PHOSPHO1Q8TCT1 267 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 G6PC3Q9BUM1 346 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 WDR76Q9H967 626 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 NANSQ9NR45 359 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 DZANK1Q9NVP4 752 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 NPTNQ9Y639 398 aa14.39□□□□□ -0.11
LDLR-204ENST00000545707 TCRBV21S2A2A0A5A6 115 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 B4DGG1 531 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 RAD1O60671 282 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 CTNSO60931 367 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 CD1AP06126 327 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 MST1P26927 711 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 OC90Q02509 493 aaPredicted RBP14.38□□□□□ -0.11
LDLR-204ENST00000545707 DLX2Q07687 328 aaPredicted RBP14.38□□□□□ -0.11
LDLR-204ENST00000545707 ALG10Q5BKT4 473 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 ARMC6Q6NXE6 501 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 SEZ6L2Q6UXD5 910 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 NHLRC1Q6VVB1 395 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 MED25Q71SY5 747 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.38□□□□□ -0.11
LDLR-204ENST00000545707 SLC43A2Q8N370 569 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 LRFN5Q96NI6 719 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 C1QTNF6Q9BXI9 259 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 KCNK15Q9H427 330 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 PLEKHA1Q9HB21 404 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 DIABLOQ9NR28 239 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 PTTG3PQ9NZH4 202 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 TICRRQ7Z2Z1 1910 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 ATG2AQ2TAZ0 1938 aa14.38□□□□□ -0.11
LDLR-204ENST00000545707 A8MUA0 341 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 PRAMEF2O60811 474 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 FBXO45P0C2W1 286 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 MAOBP27338 520 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 ITPKBP27987 946 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 NUDT1P36639 197 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 PPM1FP49593 454 aaPredicted RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 AP2S1P53680 142 aaPredicted RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 EGR4Q05215 589 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 EIF2B5Q13144 721 aaKnown RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 ALKBH1Q13686 389 aaKnown RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 Q499Y3 187 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 LRRC69Q6ZNQ3 347 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 CHMP1BQ7LBR1 199 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 FAM122BQ7Z309 247 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 DPY19L4Q7Z388 723 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 RPS4Y2Q8TD47 263 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 KTI12Q96EK9 354 aaPredicted RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 MSANTD3Q96H12 275 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 MTIF3Q9H2K0 278 aaKnown RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 SEMA6CQ9H3T2 930 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 NPDC1Q9NQX5 325 aaPredicted RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 PIPOXQ9P0Z9 390 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 UBQLN2Q9UHD9 624 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 ANKRD20A5PA0PJZ0 165 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 MEIS3P1A6NDR6 274 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 M0R233 179 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 ZNF749O43361 778 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 RGS11O94810 467 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 TGM6O95932 706 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 IFNA7P01567 189 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 ADH7P40394 386 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 ART1P52961 327 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 TAS2R20P59543 309 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 PRPS1P60891 318 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 UBE2MP61081 183 aaKnown RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 CBFBQ13951 182 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 GRM7Q14831 915 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 ZNF74Q16587 644 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 YOD1Q5VVQ6 348 aaPredicted RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 MAMSTRQ6ZN01 415 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 SLC16A9Q7RTY1 509 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 GLB1L2Q8IW92 636 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 DND1Q8IYX4 353 aaKnown RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 PRR22Q8IZ63 422 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 OR6V1Q8N148 313 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 C19orf47Q8N9M1 422 aaKnown RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 OR6N2Q8NGY6 317 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 HAVCR1Q96D42 359 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 MMABQ96EY8 250 aaPredicted RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 LPAR4Q99677 370 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 MAP3K3Q99759 626 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 SCML1Q9UN30 329 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 RNF215Q9Y6U7 377 aa14.37□□□□□ -0.11
LDLR-204ENST00000545707 ARID1BQ8NFD5 2236 aaPredicted RBP14.37□□□□□ -0.11
LDLR-204ENST00000545707 SHOXO15266 292 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 AKR7A3O95154 331 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 WISP1O95388 367 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 SIX6O95475 246 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 ECDO95905 644 aaPredicted RBP14.36□□□□□ -0.11
LDLR-204ENST00000545707 CD14P08571 375 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 CXCL2P19875 107 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 MAZP56270 477 aaKnown RBP14.36□□□□□ -0.11
LDLR-204ENST00000545707 HYAL1Q12794 435 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 KLHL26Q53HC5 615 aa14.36□□□□□ -0.11
LDLR-204ENST00000545707 METTL11BQ5VVY1 283 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms