RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 PRKXP51817 358 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 EFNA3P52797 238 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ENPEPQ07075 957 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 SIGLEC14Q08ET2 396 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 BST2Q10589 180 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 SERTAD2Q14140 314 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 LTB4RQ15722 352 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 XKR7Q5GH72 579 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 PVRIGQ6DKI7 326 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 TTC19Q6DKK2 380 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 LRRC31Q6UY01 552 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 HSDL2Q6YN16 418 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 DHDDSQ86SQ9 333 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 LUZP2Q86TE4 346 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ERI1Q8IV48 349 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 GPR137CQ8N3F9 429 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 MAPK1IP1LQ8NDC0 245 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 OR9A4Q8NGU2 314 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 HTR3CQ8WXA8 447 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 STARD8Q92502 1023 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 UBE2E3Q969T4 207 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 NUS1Q96E22 293 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF641Q96N77 438 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 OR5M11Q96RB7 305 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 IL4I1Q96RQ9 567 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 C11orf70Q9BRQ4 267 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 RIOK1Q9BRS2 568 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 OPN3Q9H1Y3 402 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 IKZF5Q9H5V7 419 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ISG20L2Q9H9L3 353 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ZFP14Q9HCL3 533 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ZNHIT6Q9NWK9 470 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 PAK1IP1Q9NWT1 392 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 CTSZQ9UBR2 303 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF639Q9UID6 485 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 PSME2Q9UL46 239 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 SAMD4AQ9UPU9 718 aaKnown RBP3.36□□□□□ -1.87
SNHG1-217ENST00000541578 SCML2Q9UQR0 700 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 PLLPQ9Y342 182 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 NLRC5Q86WI3 1866 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 MYH7BA7E2Y1 1941 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 CACNA1GO43497 2377 aa3.36□□□□□ -1.87
SNHG1-217ENST00000541578 RALGAPA2Q2PPJ7 1873 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 SERTM2A0A1B0GWG4 89 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 CCT8L1PA6NM43 557 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 SULT2B1O00204 365 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 SOCS3O14543 225 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 CXCL13O43927 109 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 DFNA5O60443 496 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 RAMP3O60896 148 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 NOL4O94818 638 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 OXSR1O95747 527 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 GNA14O95837 355 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 FGF4P08620 206 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 PABPC4LP0CB38 370 aaKnown RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 CT45A10P0DMU9 189 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 UMPSP11172 480 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ATP1B2P14415 290 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ETS2P15036 469 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 IL9P15248 144 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF24P17028 368 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 MSNP26038 577 aaKnown RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 IFNA8P32881 189 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 LEPP41159 167 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 NBL1P41271 181 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 MAGEA9P43362 315 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 DUSP3P51452 185 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 C21orf59P57076 290 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 MRPS11P82912 194 aaKnown RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 CD300CQ08708 224 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ASPHQ12797 758 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 CYLC2Q14093 348 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ARHGAP19Q14CB8 494 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 TGFBIQ15582 683 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 KRT71Q3SY84 523 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 NHLRC3Q5JS37 347 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 SAMD4BQ5PRF9 694 aaKnown RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 CCDC122Q5T0U0 273 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 C1orf185Q5T7R7 199 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 HHATQ5VTY9 493 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 WSCD1Q658N2 575 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ZNF57Q68EA5 555 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 UQCC3Q6UW78 93 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ENPP6Q6UWR7 440 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 C19orf35Q6ZS72 473 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 TMEM179Q6ZVK1 233 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 STXBP4Q6ZWJ1 553 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 BZW1Q7L1Q6 419 aaKnown RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 DEFB128Q7Z7B8 93 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 FLVCR1-AS1Q8TAF5 88 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 MAGEE2Q8TD90 523 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ST8SIA1Q92185 356 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 POM121L2Q96KW2 1035 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 MCCC1Q96RQ3 725 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-217ENST00000541578 CYP2S1Q96SQ9 504 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 FMO2Q99518 471 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 MAPKAP1Q9BPZ7 522 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 ADNPQ9H2P0 1102 aa3.35□□□□□ -1.87
SNHG1-217ENST00000541578 RHBGQ9H310 441 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms