RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TOMM34Q15785 309 aaPredicted RBP11.11□□□□□ -0.63
SCARB1-204ENST00000535005 TMEM44Q2T9K0 475 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 PLPPR5Q32ZL2 321 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 PLEKHN1Q494U1 663 aaPredicted RBP11.11□□□□□ -0.63
SCARB1-204ENST00000535005 TMEM201Q5SNT2 666 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 ULK3Q6PHR2 472 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 ARSKQ6UWY0 536 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 PLEKHM3Q6ZWE6 761 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 HDDC2Q7Z4H3 204 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF563Q8TA94 476 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 DNAJA4Q8WW22 397 aaPredicted RBP11.11□□□□□ -0.63
SCARB1-204ENST00000535005 AP3S1Q92572 193 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 PNPLA2Q96AD5 504 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 ZBTB8AQ96BR9 441 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 NEDD4LQ96PU5 975 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 KCNS3Q9BQ31 491 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 TTYH2Q9BSA4 534 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 MED18Q9BUE0 208 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 ANKRD19PQ9H560 264 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF703Q9H7S9 590 aaPredicted RBP11.11□□□□□ -0.63
SCARB1-204ENST00000535005 LHX6Q9UPM6 363 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 NTNG1Q9Y2I2 539 aa11.11□□□□□ -0.63
SCARB1-204ENST00000535005 CPSF4LA6NMK7 179 aaKnown RBP11.1□□□□□ -0.63
SCARB1-204ENST00000535005 J3KTA2 159 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 CDC40O60508 579 aaKnown RBP eCLIP11.1□□□□□ -0.632e-6■□□□□ 8.5
SCARB1-204ENST00000535005 GPX5O75715 221 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 THY1P04216 161 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 HPNP05981 417 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 EIF1P41567 113 aaKnown RBP11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF41P51814 821 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-204ENST00000535005 SMIM11AP58511 58 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 TAS2R41P59536 307 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 PPIAP62937 165 aaKnown RBP11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ST3GAL3Q11203 375 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF79Q15937 498 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 SSX1Q16384 188 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ST3GAL2Q16842 350 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 SLC6A19Q695T7 634 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 MZT2BQ6NZ67 158 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 METAP1DQ6UB28 335 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-204ENST00000535005 RFPL4BQ6ZWI9 263 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 GRINAQ7Z429 371 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ELMOD2Q8IZ81 293 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 CADM2Q8N3J6 435 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 TMEM251Q8N6I4 163 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 C3orf49Q96BT1 292 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 SLC41A3Q96GZ6 507 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 MRGPRX4Q96LA9 322 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 OPALINQ96PE5 141 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 MND1Q9BWT6 205 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 NMNAT1Q9HAN9 279 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF71Q9NQZ8 489 aaPredicted RBP11.1□□□□□ -0.63
SCARB1-204ENST00000535005 NDUFB11Q9NX14 153 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ING3Q9NXR8 418 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 B3GNT2Q9NY97 397 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 RPS6KB2Q9UBS0 482 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 SSR3Q9UNL2 185 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 ATMQ13315 3056 aa11.1□□□□□ -0.63
SCARB1-204ENST00000535005 LOC105371267A0A1B0GV96 52 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 A0A1W2PRQ8 180 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ZAR1LA6NP61 321 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 RGS5O15539 181 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 GMFGO60234 142 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 DIRAS1O95057 198 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 HSMCR30P0CW71 290 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 CDH12P55289 794 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 PLGLB1Q02325 96 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 MLLT11Q13015 90 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 MED22Q15528 200 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ESCO2Q56NI9 601 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 CEP78Q5JTW2 689 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 LINC00114Q6XXX2 140 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 GDF7Q7Z4P5 450 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ATG4DQ86TL0 474 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 GTPBP8Q8N3Z3 284 aaPredicted RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 DMRTB1Q96MA1 342 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 FNDC11Q9BVV2 318 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 MFRPQ9BY79 579 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 RNF167Q9H6Y7 350 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ACKR4Q9NPB9 350 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 MAN2C1Q9NTJ4 1040 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 KCNN3Q9UGI6 736 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 DKKL1Q9UK85 242 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 NUP50Q9UKX7 468 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 TMA7Q9Y2S6 64 aaKnown RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 LSM2Q9Y333 95 aaKnown RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 PCNX3Q9H6A9 2034 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 EPG5Q9HCE0 2579 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ACOT7O00154 380 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 CHP2O43745 196 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 H1F0P07305 194 aaKnown RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 PNMTP11086 282 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 ZNF17P17021 662 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 HK1P19367 917 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 GDF1P27539 372 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 TACR3P29371 465 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 APOBEC1P41238 236 aaKnown RBP11.09□□□□□ -0.63
SCARB1-204ENST00000535005 HTR2BP41595 481 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 LIMS1P48059 325 aa11.09□□□□□ -0.63
SCARB1-204ENST00000535005 POLR2HP52434 150 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms