RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ZP4Q12836 540 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 RAB35Q15286 201 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 CLEC12BQ2HXU8 276 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 TBRG1Q3YBR2 411 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 C9orf135Q5VTT2 229 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 Q71RC1 249 aaPredicted RBP8.4□□□□□ -1.06
CHD7-208ENST00000528280 ARPINQ7Z6K5 226 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 CALHM3Q86XJ0 350 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 KDM8Q8N371 416 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 MUC15Q8N387 334 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 OR4F15Q8NGB8 312 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 OR6T1Q8NGN1 323 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 OR5J2Q8NH18 312 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 ADAMTS16Q8TE57 1224 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 C10orf82Q8WW14 230 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 LZICQ8WZA0 190 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 COX4I2Q96KJ9 171 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 HOPXQ9BPY8 73 aaPredicted RBP8.4□□□□□ -1.06
CHD7-208ENST00000528280 KATNB1Q9BVA0 655 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 PRR14Q9BWN1 585 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 C1QTNF6Q9BXI9 259 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 RSPO3Q9BXY4 272 aaPredicted RBP8.4□□□□□ -1.06
CHD7-208ENST00000528280 NANSQ9NR45 359 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 CAPN7Q9Y6W3 813 aa8.4□□□□□ -1.06
CHD7-208ENST00000528280 A0A1W2PR80 420 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 GMNCA6NCL1 334 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 CPSF4LA6NMK7 179 aaKnown RBP8.39□□□□□ -1.07
CHD7-208ENST00000528280 H7C1Q1 480 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 M0R3H8 397 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 IGF2P01344 180 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 CD8AP01732 235 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 HEXAP06865 529 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 CBR1P16152 277 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 CBLP22681 906 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 RBM34P42696 430 aaKnown RBP8.39□□□□□ -1.07
CHD7-208ENST00000528280 GUCY1A3Q02108 690 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 SELPLGQ14242 412 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 HIKESHIQ53FT3 197 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 REP15Q6BDI9 236 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 COMTD1Q86VU5 262 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 C20orf196Q8IYI0 205 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 GPR32P1Q8NGA4 272 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 OR6N1Q8NGY5 312 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 NEUROG1Q92886 237 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 TAMM41Q96BW9 452 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 ZNF583Q96ND8 569 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 SLC38A2Q96QD8 506 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 OR2M2Q96R28 347 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 SMR3AQ99954 134 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 RHNO1Q9BSD3 238 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 EFCAB1Q9HAE3 211 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 CRLF2Q9HC73 371 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 GPR35Q9HC97 309 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 B3GAT1Q9P2W7 334 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 CRNNQ9UBG3 495 aaPredicted RBP8.39□□□□□ -1.07
CHD7-208ENST00000528280 ZNF229Q9UJW7 825 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 FBXL3Q9UKT7 428 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 POFUT2Q9Y2G5 429 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 SH3GLB1Q9Y371 365 aa8.39□□□□□ -1.07
CHD7-208ENST00000528280 ROS1P08922 2347 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 ELOVL7A1L3X0 281 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 SLC35F4A4IF30 521 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 ZNF99A8MXY4 864 aaPredicted RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 TRAF3IP2O43734 574 aaPredicted RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 OR5F1O95221 314 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 OPN1SWP03999 348 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 ADORA3P0DMS8 318 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 KDELR2P33947 212 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 CDKN1AP38936 164 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 TAS2R41P59536 307 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 SELENOWP63302 87 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 ARF1P84077 181 aaKnown RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 ZNF74Q16587 644 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 RABL3Q5HYI8 236 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 PIWIL3Q7Z3Z3 882 aaKnown RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 HDDC2Q7Z4H3 204 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 DPPA2Q7Z7J5 298 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 OR2T12Q8NG77 320 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 OR6X1Q8NH79 312 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 VANGL1Q8TAA9 524 aaPredicted RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 CMTM5Q96DZ9 223 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 ALKBH3Q96Q83 286 aaPredicted RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 CCT8L2Q96SF2 557 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 NSRP1Q9H0G5 558 aaKnown RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 STX18Q9P2W9 335 aaKnown RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 RIMS3Q9UJD0 308 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 SLC7A7Q9UM01 511 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 USP22Q9UPT9 525 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 MOKQ9UQ07 419 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 SPEF1Q9Y4P9 236 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 PRR14LQ5THK1 2151 aa8.38□□□□□ -1.07
CHD7-208ENST00000528280 HEATR1Q9H583 2144 aaKnown RBP8.38□□□□□ -1.07
CHD7-208ENST00000528280 A0A096LPE4 126 aa8.37□□□□□ -1.07
CHD7-208ENST00000528280 IGHV1-18A0A0C4DH31 117 aa8.37□□□□□ -1.07
CHD7-208ENST00000528280 A0A1W2PPZ6 126 aa8.37□□□□□ -1.07
CHD7-208ENST00000528280 FAM220BPB1ANY3 271 aa8.37□□□□□ -1.07
CHD7-208ENST00000528280 CENPBD1B2RD01 187 aa8.37□□□□□ -1.07
CHD7-208ENST00000528280 B9A039 149 aa8.37□□□□□ -1.07
CHD7-208ENST00000528280 H7C417 338 aa8.37□□□□□ -1.07
CHD7-208ENST00000528280 M0R3G1 203 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms