RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ALKBH3Q96Q83 286 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 ANKRD19PQ9H560 264 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 GORASP2Q9H8Y8 452 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 TAS2R5Q9NYW4 299 aa18.31■□□□□ 0.52
TRAPPC9-215ENST00000524162 ZNF469Q96JG9 3925 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 NPIPB13A6NJU9 1138 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 NPIPB4C9JG80 1138 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 LRRN3E7EW58 273 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 OR6A2O95222 327 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 PLAUP00749 431 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 HIST1H2ABP04908 130 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 ADORA3P0DMS8 318 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 CBLP22681 906 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 ROR2Q01974 943 aaKnown RBP18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 ZNF672Q499Z4 452 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 KLHL24Q6TFL4 600 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 HIST3H2AQ7L7L0 130 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 LINGO2Q7L985 606 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 SLC46A3Q7Z3Q1 461 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 NKAIN4Q8IVV8 208 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 C20orf196Q8IYI0 205 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 OR52N5Q8NH56 324 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 OR6X1Q8NH79 312 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 BCL2L2Q92843 193 aaPredicted RBP18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 HIST1H2ACQ93077 130 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 FBXW5Q969U6 566 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 CCL19Q99731 98 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 GMPR2Q9P2T1 348 aaKnown RBP18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 MED31Q9Y3C7 131 aa18.3■□□□□ 0.52
TRAPPC9-215ENST00000524162 CENPBD1B2RD01 187 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 SERPINA1P01009 418 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 HLA-DOBP13765 273 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 CD40P25942 277 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 ANKDD1AQ495B1 522 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 SAMD4BQ5PRF9 694 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 SHEQ5VZ18 495 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 PRSS57Q6UWY2 283 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 VTCN1Q7Z7D3 282 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 RNF113BQ8IZP6 322 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 TMEM255BQ8WV15 326 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 AKAP1Q92667 903 aaKnown RBP eCLIP18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 GSX2Q9BZM3 304 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 GPR35Q9HC97 309 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 B3GAT2Q9NPZ5 323 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 DCAF13Q9NV06 445 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 CD300AQ9UGN4 299 aa18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 SAMD4AQ9UPU9 718 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-215ENST00000524162 SLC35F4A4IF30 521 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 ZNF726A6NNF4 738 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 SHISA9B4DS77 424 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 GMNNO75496 209 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 OR7A10O76100 309 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 PRSS23O95084 383 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 ZNF682O95780 498 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 DANCRP0C864 163 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 AHCYP23526 432 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 UGT2B15P54855 530 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 IL1RL1Q01638 556 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 TRAM2Q15035 370 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 TBRG1Q3YBR2 411 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 GLYATQ6IB77 296 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 ALKBH2Q6NS38 261 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 C16orf89Q6UX73 402 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 TGIF2LYQ8IUE0 185 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 FAM162AQ96A26 154 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 SGTBQ96EQ0 304 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 HSH2DQ96JZ2 352 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 ZNF701Q9NV72 531 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 ARL8BQ9NVJ2 186 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 ADA2Q9NZK5 511 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 CRNNQ9UBG3 495 aaPredicted RBP18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 MAGEL2Q9UJ55 1249 aa18.28■□□□□ 0.52
TRAPPC9-215ENST00000524162 ZNF99A8MXY4 864 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 ABCD4O14678 606 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 CLOCKO15516 846 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 ARHGEF9O43307 516 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 SMPD2O60906 423 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 FUT1P19526 365 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 LGALS3BPQ08380 585 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 C9orf135Q5VTT2 229 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 FKBP9P1Q75LS8 142 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 SLC35D2Q76EJ3 337 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 HDDC2Q7Z4H3 204 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 NANOGNBQ7Z5D8 188 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 ARHGAP24Q8N264 748 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 FITM2Q8N6M3 262 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 LRRC17Q8N6Y2 441 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 TMEM171Q8WVE6 324 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 FNDC11Q9BVV2 318 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 NELFAQ9H3P2 528 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 CXorf56Q9H5V9 222 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 CRLF2Q9HC73 371 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 MAN2C1Q9NTJ4 1040 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 FAIMQ9NVQ4 179 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 MED29Q9NX70 200 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 STX18Q9P2W9 335 aaKnown RBP18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 ENPP4Q9Y6X5 453 aa18.27■□□□□ 0.52
TRAPPC9-215ENST00000524162 KPNA4O00629 521 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 FFAR1O14842 300 aa18.26■□□□□ 0.51
TRAPPC9-215ENST00000524162 IFNGR1P15260 489 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms