RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 CD3DP04234 171 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 FAM157CP0CG43 387 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 SLC25A4P12235 298 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 IL9P15248 144 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 PGAM2P15259 253 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 PDHA2P29803 388 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 PSMB10P40306 273 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 AP1S1P61966 158 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 TDGQ13569 410 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 KIAA0141Q14154 515 aaPredicted RBP9.33□□□□□ -0.92
SPIDR-224ENST00000524126 OR8G1Q15617 311 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 AGTRAPQ6RW13 159 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 EID2Q8N6I1 236 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 AVL9Q8NBF6 648 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 OR5M8Q8NGP6 311 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 GPBAR1Q8TDU6 330 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 RNF141Q8WVD5 230 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 CLP1Q92989 425 aaKnown RBP9.33□□□□□ -0.92
SPIDR-224ENST00000524126 UBQLN3Q9H347 655 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 BRD9Q9H8M2 597 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 NRIP3Q9NQ35 241 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 SCML2Q9UQR0 700 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 A0A1W2PPE2 198 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 C7orf77A4D0Y5 90 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 KIAA0355O15063 1070 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 UGDHO60701 494 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 RDH16O75452 317 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 RBBP9O75884 186 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 ARL6IP5O75915 188 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 MBP02144 154 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 RHOCP08134 193 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 CHRM4P08173 479 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 CD53P19397 219 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 GLP1RP43220 463 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 AIMP2Q13155 320 aaKnown RBP9.33□□□□□ -0.92
SPIDR-224ENST00000524126 ZNF239Q16600 458 aaKnown RBP9.33□□□□□ -0.92
SPIDR-224ENST00000524126 ACTBL2Q562R1 376 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 SLC39A5Q6ZMH5 540 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 IL34Q6ZMJ4 242 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 ABHD13Q7L211 337 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 OVCH1Q7RTY7 1134 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 PAQR4Q8N4S7 273 aaPredicted RBP9.33□□□□□ -0.92
SPIDR-224ENST00000524126 CYB561A3Q8NBI2 242 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 TMEM255BQ8WV15 326 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 SECTM1Q8WVN6 248 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 TEX12Q9BXU0 123 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 MYNNQ9NPC7 610 aa9.33□□□□□ -0.92
SPIDR-224ENST00000524126 DOCK6Q96HP0 2047 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 LOC100509620A0A075B734 347 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 H3BNC9 293 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 K7ERQ8 282 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 RTCAO00442 366 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SOX15O60248 233 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 BRINP1O60477 761 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 IFNGP01579 166 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 CLTBP09497 229 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 C6P13671 934 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SRMP19623 302 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 FAUP35544 74 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 GSK3AP49840 483 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 CAV2P51636 162 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 TAS2R43P59537 309 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 HTRA4P83105 476 aaPredicted RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 CNTN1Q12860 1018 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 GFI1BQ5VTD9 330 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 PRPF38BQ5VTL8 546 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 RNF219Q5W0B1 726 aaPredicted RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 NSUN5P2Q63ZY6 315 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 GID4Q8IVV7 300 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 OR4K14Q8NGD5 310 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 NUDCD2Q8WVJ2 157 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 OTUB2Q96DC9 234 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 CASD1Q96PB1 797 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 MICU1Q9BPX6 476 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SULT4A1Q9BR01 284 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SIRT3Q9NTG7 399 aaPredicted RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 GAR1Q9NY12 217 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 NCDNQ9UBB6 729 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 LHX3Q9UBR4 397 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 NOP16Q9Y3C1 178 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 CBY1Q9Y3M2 126 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SPTBN5Q9NRC6 3674 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 A0A1B0GTI1 187 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SYNDIG1LA6NDD5 238 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 TMEM202A6NGA9 273 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 M0R036 132 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 MED6O75586 246 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 ACRP10323 421 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 NDUFV2P19404 249 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 IFNGR2P38484 337 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 RBM34P42696 430 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 CDX1P47902 265 aaPredicted RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SLC11A1P49279 550 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 NUTF2P61970 127 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 SLBPQ14493 270 aaKnown RBP eCLIP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 MEF2DQ14814 521 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 DHCR24Q15392 516 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 EXOSC6Q5RKV6 272 aaKnown RBP9.32□□□□□ -0.92
SPIDR-224ENST00000524126 MED27Q6P2C8 311 aa9.32□□□□□ -0.92
SPIDR-224ENST00000524126 FAM111BQ6SJ93 734 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms