RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 RCBTB1Q8NDN9 531 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 CPNE2Q96FN4 548 aaPredicted RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 IFT22Q9H7X7 185 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 LIN7BQ9HAP6 207 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 DUSP22Q9NRW4 184 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 A4GNTQ9UNA3 340 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 PTRH2Q9Y3E5 179 aaKnown RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 QSER1Q2KHR3 1735 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 OR5K3A6NET4 321 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 KCNK2O95069 426 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 PSMB1P20618 241 aaKnown RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 CSNK2A1P68400 391 aaPredicted RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 CSNK2A3Q8NEV1 391 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 DDIT4LQ96D03 193 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 OR51B6Q9H340 312 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 ACKR4Q9NPB9 350 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 FBXL2Q9UKC9 423 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 SPTAN1Q13813 2472 aaKnown RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 MEGF11A6BM72 1044 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 SUSD5O60279 629 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF780AO75290 641 aaPredicted RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 HRGP04196 525 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 CD1CP29017 333 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 DLX2Q07687 328 aaPredicted RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 FAAP20Q6NZ36 180 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 C8orf82Q6P1X6 216 aaPredicted RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 OR52N1Q8NH53 320 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 HOXB13Q92826 284 aaPredicted RBP10.77□□□□□ -0.69
SYNPO-204ENST00000519664 SEMA6CQ9H3T2 930 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 NT5DC2Q9H857 520 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 INPP5EQ9NRR6 644 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 EMC9Q9Y3B6 208 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 PPIL1Q9Y3C6 166 aa10.77□□□□□ -0.69
SYNPO-204ENST00000519664 OTOL1A6NHN0 477 aaPredicted RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 GNRHRP30968 328 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 CXCL12P48061 93 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 EIF5AP63241 154 aaKnown RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 HSD11B2P80365 405 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 EEF1A2Q05639 463 aaKnown RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 SEC22CQ9BRL7 303 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 C12orf10Q9HB07 376 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF160Q9HCG1 818 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 NRIP3Q9NQ35 241 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 PRDM7Q9NQW5 492 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 NDUFB11Q9NX14 153 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 TRABD2BA6NFA1 517 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 PHYHO14832 338 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 ERCC1P07992 297 aaPredicted RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 NAT2P11245 290 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 GFERP55789 205 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 DUSP6Q16828 381 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 FAM174AQ8TBP5 190 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 RBPMSQ93062 196 aaKnown RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 NKX3-1Q99801 234 aaPredicted RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 SLC5A7Q9GZV3 580 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 FBXO34Q9NWN3 711 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 KCNIP3Q9Y2W7 256 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 A0A0A6YYH2 397 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 A6NJ64 397 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 LAMTOR5O43504 91 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 NUDT21O43809 227 aaKnown RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 C1QBP02746 253 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 MTNR1BP49286 362 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 DGCR2P98153 550 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 ACY1Q03154 408 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 FAM189A2Q15884 450 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 NLRP8Q86W28 1048 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 CCDC71Q8IV32 467 aaPredicted RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 OR51T1Q8NGJ9 327 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 TSLPQ969D9 159 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 LCORQ96JN0 433 aaPredicted RBP10.76□□□□□ -0.69
SYNPO-204ENST00000519664 OR11A1Q9GZK7 315 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF576Q9H609 170 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 ANKRD10Q9NXR5 420 aa10.76□□□□□ -0.69
SYNPO-204ENST00000519664 GPRIN2O60269 458 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 HBQ1P09105 142 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 HTR2AP28223 471 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 TRHRP34981 398 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 GPR176Q14439 515 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 LRRC18Q8N456 261 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 C16orf52Q8NHV5 167 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 B3GAT2Q9NPZ5 323 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 PLSCR3Q9NRY6 295 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 CGGBP1Q9UFW8 167 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 FITM1A5D6W6 292 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 F5H5P2 479 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 SSX4O60224 188 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 CTSVO60911 334 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 WDPCPO95876 746 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 CISD3P0C7P0 127 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 SRMP19623 302 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 IL13RA1P78552 427 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 GPR139Q6DWJ6 353 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 TSSK4Q6SA08 328 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF704Q6ZNC4 412 aaPredicted RBP10.75□□□□□ -0.69
SYNPO-204ENST00000519664 GPR137CQ8N3F9 429 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 BPIFB2Q8N4F0 458 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 ZNF611Q8N823 705 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 OR56B4Q8NH76 319 aa10.75□□□□□ -0.69
SYNPO-204ENST00000519664 CD300LFQ8TDQ1 290 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms