RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 NMRAL1Q9HBL8 299 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 MRPS30Q9NP92 439 aaKnown RBP2.46□□□□□ -2.02
HERC4-215ENST00000515753 LZTFL1Q9NQ48 299 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 CHRAC1Q9NRG0 131 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 EHFQ9NZC4 300 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 BFARQ9NZS9 450 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 WRAP73Q9P2S5 460 aaPredicted RBP2.46□□□□□ -2.02
HERC4-215ENST00000515753 SLC7A8Q9UHI5 535 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 TBC1D24Q9ULP9 559 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 MRPL11Q9Y3B7 192 aaKnown RBP2.46□□□□□ -2.02
HERC4-215ENST00000515753 STYXL1Q9Y6J8 313 aa2.46□□□□□ -2.02
HERC4-215ENST00000515753 GOLGB1Q14789 3259 aaKnown RBP2.46□□□□□ -2.02
HERC4-215ENST00000515753 ANKRD31Q8N7Z5 1873 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 AFDNP55196 1824 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 A0A0J9YYE9 177 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 LOC100653049A0A140TA62 436 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 LSM1O15116 133 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 RNF113AO15541 343 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 AKR7A2O43488 359 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 CHMP2AO43633 222 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 CXCL13O43927 109 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 ZNF354AO60765 605 aaPredicted RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 SH3BGRLO75368 114 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 KRT34O76011 436 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 OR2F2O95006 317 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 TMEM50AO95807 157 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 PAHP00439 452 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 TRBC1P01850 177 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 CRYGCP07315 174 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 H2AFZP0C0S5 128 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 UBTFL1P0CB47 393 aaPredicted RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 GNA11P29992 359 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 RRM2P31350 389 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 ATP5C1P36542 298 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 CSNK1EP49674 416 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 HNRNPA3P51991 378 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 ACLYP53396 1101 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 MFAP2P55001 183 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 OC90Q02509 493 aaPredicted RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 ACY1Q03154 408 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 TCP10Q12799 353 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 STK11Q15831 433 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 CYP51A1Q16850 503 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 EIPR1Q53HC9 387 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 LGSNQ5TDP6 509 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 MEDAGQ5VYS4 303 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 PLCXD3Q63HM9 321 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 TMEM53Q6P2H8 277 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 TMEM220Q6QAJ8 160 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 ENPP6Q6UWR7 440 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 SERPINA9Q86WD7 417 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 ERI1Q8IV48 349 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 GABRG1Q8N1C3 465 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 LINC01561Q8N1V8 128 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 ZNRF1Q8ND25 227 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 OR4D9Q8NGE8 314 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 OR13F1Q8NGS4 319 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 GPX8Q8TED1 209 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 LRRC39Q96DD0 335 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 CXorf40BQ96DE9 158 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 TIMD4Q96H15 378 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 HSD17B14Q9BPX1 270 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 MAPKAP1Q9BPZ7 522 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 API5Q9BZZ5 524 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 BLZF1Q9H2G9 400 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 RHBGQ9H310 441 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 PPDPFQ9H3Y8 114 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 LIME1Q9H400 295 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 RNF41Q9H4P4 317 aaPredicted RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 RGCCQ9H4X1 137 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 IKZF5Q9H5V7 419 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 ZNF385DQ9H6B1 395 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 CYP3A43Q9HB55 503 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 POPDC2Q9HBU9 364 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 EXOSC3Q9NQT5 275 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 ABCC13Q9NSE7 274 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 C20orf96Q9NUD7 363 aaPredicted RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 ELOVL2Q9NXB9 296 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 CLEC5AQ9NY25 188 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 PDP1Q9P0J1 537 aaPredicted RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 MLXQ9UH92 298 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 VANGL2Q9ULK5 521 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 MGAT4AQ9UM21 535 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 COPS3Q9UNS2 423 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 N6AMT1Q9Y5N5 214 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 ARFGEF2Q9Y6D5 1785 aa2.45□□□□□ -2.02
HERC4-215ENST00000515753 VIRMAQ69YN4 1812 aaKnown RBP2.45□□□□□ -2.02
HERC4-215ENST00000515753 GAKO14976 1311 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 FANCIQ9NVI1 1328 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 DICER1Q9UPY3 1922 aaKnown RBP2.44□□□□□ -2.02
HERC4-215ENST00000515753 IGLV3-10A0A075B6K4 115 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 IGHV3OR16-12A0A075B7B8 117 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 A0A087WWV3 80 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 TRGV8A0A0C4DH27 118 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.44□□□□□ -2.02
HERC4-215ENST00000515753 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.44□□□□□ -2.02
HERC4-215ENST00000515753 A0A1W2PPV9 198 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 PP2D1A8MPX8 630 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 E7ESA3 106 aa2.44□□□□□ -2.02
HERC4-215ENST00000515753 H3BMQ9 156 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms