RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 ZNF627Q7L945 461 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 LINGO2Q7L985 606 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 HDXQ7Z353 690 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 TEX29Q8N6K0 151 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 ANKS4BQ8N8V4 417 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 NFKBIDQ8NI38 313 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 BBS10Q8TAM1 723 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 DYDC1Q8WWB3 177 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 CKAP2Q8WWK9 683 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 SLC38A4Q969I6 547 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 PTDSS2Q9BVG9 487 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 NELFAQ9H3P2 528 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 GPR35Q9HC97 309 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 INTS9Q9NV88 658 aaKnown RBP10.88□□□□□ -0.67
VEGFA-216ENST00000512683 RPS6KB2Q9UBS0 482 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 CORINQ9Y5Q5 1042 aa10.88□□□□□ -0.67
VEGFA-216ENST00000512683 YLPM1P49750 1951 aaKnown RBP10.88□□□□□ -0.67
VEGFA-216ENST00000512683 SVEP1Q4LDE5 3571 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 TRAV36DV7A0A075B6V5 113 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 A0A096LPE4 126 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 IGHV2OR16-5A0A0B4J2B6 119 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 A0A1W2PPZ6 126 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 B4DSR2 109 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 HAX1O00165 279 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 TPST1O60507 370 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 NR4A1P22736 598 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 PRKAR1BP31321 381 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 DVL1P1P54792 670 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-216ENST00000512683 TMEM33P57088 247 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 DAG1Q14118 895 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 ADRM1Q16186 407 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 MMEL1Q495T6 779 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 FAM91A1Q658Y4 838 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 VHLLQ6RSH7 139 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 SPATA21Q7Z572 469 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 SCAIQ8N9R8 606 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 BHLHE22Q8NFJ8 381 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-216ENST00000512683 STON2Q8WXE9 905 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 THOC1Q96FV9 657 aaKnown RBP10.87□□□□□ -0.67
VEGFA-216ENST00000512683 MAGEB18Q96M61 343 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 ALKBH3Q96Q83 286 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-216ENST00000512683 EPYCQ99645 322 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 SPATA5L1Q9BVQ7 753 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 ZNF385DQ9H6B1 395 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 VIPAS39Q9H9C1 493 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 CRLF2Q9HC73 371 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 B3GAT2Q9NPZ5 323 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 B3GNT2Q9NY97 397 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 B3GAT1Q9P2W7 334 aa10.87□□□□□ -0.67
VEGFA-216ENST00000512683 C5orf58C9J3I9 102 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 SYNGR3O43761 229 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 IFNGR1P15260 489 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 PPIBP23284 216 aaKnown RBP10.86□□□□□ -0.67
VEGFA-216ENST00000512683 APEX1P27695 318 aaKnown RBP10.86□□□□□ -0.67
VEGFA-216ENST00000512683 HTR2AP28223 471 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 GLRXP35754 106 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 SRP14P37108 136 aaKnown RBP10.86□□□□□ -0.67
VEGFA-216ENST00000512683 RPS5P46782 204 aaKnown RBP10.86□□□□□ -0.67
VEGFA-216ENST00000512683 CDH15P55291 814 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 RPS23P62266 143 aaKnown RBP10.86□□□□□ -0.67
VEGFA-216ENST00000512683 CDK6Q00534 326 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 CEACAM16Q2WEN9 425 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 GLIPR1L2Q4G1C9 344 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 GCNT6Q5T4J0 391 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 REEP3Q6NUK4 255 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 ULK3Q6PHR2 472 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 TMEM123Q8N131 208 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 KDM8Q8N371 416 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 KTI12Q96EK9 354 aaPredicted RBP10.86□□□□□ -0.67
VEGFA-216ENST00000512683 SLC47A1Q96FL8 570 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 SLC41A3Q96GZ6 507 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 WFDC6Q9BQY6 131 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 CPPED1Q9BRF8 314 aaPredicted RBP10.86□□□□□ -0.67
VEGFA-216ENST00000512683 TMEM38AQ9H6F2 299 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 DYNLRB1Q9NP97 96 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 SELENONQ9NZV5 590 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 METRNQ9UJH8 293 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 NOX1Q9Y5S8 564 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 ARFGEF3Q5TH69 2177 aa10.86□□□□□ -0.67
VEGFA-216ENST00000512683 SASH3O75995 380 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 LGALS3BPQ08380 585 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 GSG1Q2KHT4 349 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 TRMT5Q32P41 509 aaKnown RBP10.85□□□□□ -0.67
VEGFA-216ENST00000512683 RUNDC3AQ59EK9 446 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 DHRS4L2Q6PKH6 230 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 RETREG3Q86VR2 466 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 KRT73Q86Y46 540 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 PTOV1Q86YD1 416 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 C20orf196Q8IYI0 205 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 SVOPLQ8N434 492 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 TAAR8Q969N4 342 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 MRPL24Q96A35 216 aaKnown RBP10.85□□□□□ -0.67
VEGFA-216ENST00000512683 OR2M2Q96R28 347 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 REV1Q9UBZ9 1251 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 SEC14L4Q9UDX3 406 aa10.85□□□□□ -0.67
VEGFA-216ENST00000512683 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-216ENST00000512683 ANK2Q01484 3957 aa10.84□□□□□ -0.67
VEGFA-216ENST00000512683 IGKV1D-42A0A075B6H8 117 aa10.84□□□□□ -0.67
VEGFA-216ENST00000512683 A0A1B0GWA3 101 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms