RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 LINC00587B1AMM8 73 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ANKRD63C9JTQ0 380 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 G3V3Y1 287 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 M0QZK8 103 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CCRL2O00421 344 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ABCD4O14678 606 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 SLC31A2O15432 143 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MED7O43513 233 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CALUO43852 315 aaPredicted RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 SULT1C4O75897 302 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 GLCEO94923 617 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MFN2O95140 757 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 IGLV3-19P01714 112 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 IGHV3-23P01764 117 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 IFNA4P05014 189 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CRYGCP07315 174 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 RBP1P09455 135 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 IQCF3P0C7M6 154 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 LINC00614P0C842 121 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 UROSP10746 265 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 COX4I1P13073 169 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CD36P16671 472 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 NT5EP21589 574 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CRABP1P29762 137 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CCND2P30279 289 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 RORAP35398 523 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CASP3P42574 277 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CDKN2CP42773 168 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MAGEA6P43360 314 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 IER3P46695 156 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 NPBWR1P48145 328 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ALDH3B2P48448 385 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CSNK1DP48730 415 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CAMLGP49069 296 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 SLC11A1P49279 550 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CRYBB1P53674 252 aaPredicted RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 PKNOX1P55347 436 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ATP5IP56385 69 aaPredicted RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 NME5P56597 212 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 XIAPP98170 497 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 REEP5Q00765 189 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 TSPAN31Q12999 210 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MAB21L1Q13394 359 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 KRR1Q13601 381 aaKnown RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 HSDL1Q3SXM5 330 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CHRFAM7AQ494W8 412 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 UNC50Q53HI1 259 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ZNF311Q5JNZ3 666 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CDKL4Q5MAI5 379 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 PRAMEF8Q5VWM4 474 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MLIPQ5VWP3 458 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 LIPNQ5VXI9 398 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 RESP18Q5W5W9 173 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 PMF1Q6P1K2 205 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 C1orf94Q6P1W5 598 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 NPSR1Q6W5P4 371 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ASRGL1Q7L266 308 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 SSX9Q7RTT3 188 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 SMIM15Q7Z3B0 74 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 GPBP1Q86WP2 473 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 PLCZ1Q86YW0 608 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 KLHDC8AQ8IYD2 350 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 GPR65Q8IYL9 337 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ZNF679Q8IYX0 411 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MCOLN2Q8IZK6 566 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CENPSQ8N2Z9 138 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MREGQ8N565 214 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ARIH2OSQ8N7S6 290 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 CCDC197Q8NCU1 140 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 BHLHE23Q8NDY6 225 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 C19orf18Q8NEA5 215 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 OR2L3Q8NG85 312 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 AKR7LQ8NHP1 331 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 LKAAEAR1Q8TD35 194 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MAGEE2Q8TD90 523 aaPredicted RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 CD300LFQ8TDQ1 290 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MITD1Q8WV92 249 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 TSEN15Q8WW01 171 aaKnown RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 TRUB1Q8WWH5 349 aaKnown RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 ING5Q8WYH8 240 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ESR2Q92731 530 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 UFD1Q92890 307 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 NT5C3BQ969T7 300 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MRPL24Q96A35 216 aaKnown RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 TCEAL4Q96EI5 215 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 C9orf85Q96MD7 179 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 RILPQ96NA2 401 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 QKIQ96PU8 341 aaKnown RBP eCLIP1.47□□□□□ -2.17
NUP54-208ENST00000508604 TAAR1Q96RJ0 339 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ZBTB18Q99592 522 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 TCEAL7Q9BRU2 100 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 PELOQ9BRX2 385 aaKnown RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 FAM213AQ9BRX8 229 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 ZNF416Q9BWM5 594 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 BBS2Q9BXC9 721 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 MROQ9BYG7 248 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 OSBPL8Q9BZF1 889 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 OPN3Q9H1Y3 402 aaPredicted RBP1.47□□□□□ -2.17
NUP54-208ENST00000508604 OR51B6Q9H340 312 aa1.47□□□□□ -2.17
NUP54-208ENST00000508604 OR51M1Q9H341 326 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms