RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ASAH2BP0C7U1 165 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 CDH2P19022 906 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 OR1E2P47887 323 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 MNAT1P51948 309 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 PIN1Q13526 163 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 SPATS1Q496A3 300 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 IFI44LQ53G44 452 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 SLC22A25Q6T423 547 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 CBLL1Q75N03 491 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 NANOGNBQ7Z5D8 188 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 TSPYL5Q86VY4 417 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 C20orf196Q8IYI0 205 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 KBTBD8Q8NFY9 601 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 LILRB1Q8NHL6 650 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 SMAP2Q8WU79 429 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 GTPBP3Q969Y2 492 aaKnown RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 CISD1Q9NZ45 108 aaKnown RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 STX18Q9P2W9 335 aaKnown RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 MED31Q9Y3C7 131 aa17.41■□□□□ 0.38
SFXN1-209ENST00000508290 RAI1Q7Z5J4 1906 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-209ENST00000508290 SHISA9B4DS77 424 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 M0R1B8 84 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 KPNA4O00629 521 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-209ENST00000508290 ZNF682O95780 498 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 UMPSP11172 480 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 TNFRSF1BP20333 461 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 CDH11P55287 796 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 NHLRC1Q6VVB1 395 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 OFCC1Q8IZS5 231 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-209ENST00000508290 OR6X1Q8NH79 312 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 BCL2L2Q92843 193 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-209ENST00000508290 FAM162AQ96A26 154 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 CRLF2Q9HC73 371 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 GPR35Q9HC97 309 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 MEPEQ9NQ76 525 aaPredicted RBP17.4■□□□□ 0.38
SFXN1-209ENST00000508290 TAGLN3Q9UI15 199 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 POU2F3Q9UKI9 436 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 ITPR3Q14573 2671 aa17.4■□□□□ 0.38
SFXN1-209ENST00000508290 PRRC2AP48634 2157 aaKnown RBP17.39■□□□□ 0.37
SFXN1-209ENST00000508290 SLC35F4A4IF30 521 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 ZNF99A8MXY4 864 aaPredicted RBP17.39■□□□□ 0.37
SFXN1-209ENST00000508290 CENPBD1B2RD01 187 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 LRRN3E7EW58 273 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 RNF13O43567 381 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 DANCRP0C864 163 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 ETFDHQ16134 617 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 ANKDD1AQ495B1 522 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 HIKESHIQ53FT3 197 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 Q5PR19 223 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 AGAP6Q5VW22 663 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 ZNF544Q6NX49 715 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 FKBP9P1Q75LS8 142 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 ZNF627Q7L945 461 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 CYP4Z1Q86W10 505 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 OR6N1Q8NGY5 312 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 SGTBQ96EQ0 304 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 TRMT61AQ96FX7 289 aaKnown RBP17.39■□□□□ 0.37
SFXN1-209ENST00000508290 ANKRD19PQ9H560 264 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 TAS2R5Q9NYW4 299 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 SAMD4AQ9UPU9 718 aaKnown RBP17.39■□□□□ 0.37
SFXN1-209ENST00000508290 LAMP3Q9UQV4 416 aa17.39■□□□□ 0.37
SFXN1-209ENST00000508290 NPIPB13A6NJU9 1138 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 NPIPB4C9JG80 1138 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 OR7A10O76100 309 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 SERPINA1P01009 418 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 HLA-DOBP13765 273 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 PTNP21246 168 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 PTH2RP49190 550 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 GYS2P54840 703 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 LGALS3BPQ08380 585 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 TRAM2Q15035 370 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 CEACAM16Q2WEN9 425 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 GKAP1Q5VSY0 366 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-209ENST00000508290 SLC35D2Q76EJ3 337 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 LINGO2Q7L985 606 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 SLC46A3Q7Z3Q1 461 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 DTX2Q86UW9 622 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 LSRQ86X29 649 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-209ENST00000508290 NKAIN4Q8IVV8 208 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 PGAM4Q8N0Y7 254 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 TMEM255BQ8WV15 326 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 SLC25A44Q96H78 314 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-209ENST00000508290 DHRS9Q9BPW9 319 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 KCNS3Q9BQ31 491 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 KATNB1Q9BVA0 655 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 FNDC11Q9BVV2 318 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 ULBP2Q9BZM5 246 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 DENND2DQ9H6A0 471 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-209ENST00000508290 MED29Q9NX70 200 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 ADA2Q9NZK5 511 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 CRNNQ9UBG3 495 aaPredicted RBP17.38■□□□□ 0.37
SFXN1-209ENST00000508290 A4GNTQ9UNA3 340 aa17.38■□□□□ 0.37
SFXN1-209ENST00000508290 A0A1W2PR80 420 aa17.37■□□□□ 0.37
SFXN1-209ENST00000508290 C11orf98E9PRG8 122 aa17.37■□□□□ 0.37
SFXN1-209ENST00000508290 M0R3G1 203 aa17.37■□□□□ 0.37
SFXN1-209ENST00000508290 OVOL3O00110 214 aa17.37■□□□□ 0.37
SFXN1-209ENST00000508290 BMP4P12644 408 aa17.37■□□□□ 0.37
SFXN1-209ENST00000508290 IFNGR1P15260 489 aa17.37■□□□□ 0.37
SFXN1-209ENST00000508290 FUT1P19526 365 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms