RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 Q499Y3 187 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 PRRT3Q5FWE3 981 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 ULK3Q6PHR2 472 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 DPY19L2P2Q6ZN68 376 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 ZNF454Q8N9F8 522 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 RELL2Q8NC24 303 aaPredicted RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 LRFN5Q96NI6 719 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 SLC17A9Q9BYT1 436 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 CHST6Q9GZX3 395 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 MKKSQ9NPJ1 570 aaPredicted RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 RXFP3Q9NSD7 469 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 STARD5Q9NSY2 213 aa12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 MRM2Q9UI43 246 aaKnown RBP12.25□□□□□ -0.45
SNCAIP-209ENST00000508017 HRKO00198 91 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 GLCEO94923 617 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 KAT7O95251 611 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 CCL5P13501 91 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 SORDQ00796 357 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 RBMS2Q15434 407 aaKnown RBP12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 NNATQ16517 81 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 LIPNQ5VXI9 398 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 ZCCHC12Q6PEW1 402 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 FIGLAQ6QHK4 219 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 DNM1P46Q6ZS02 220 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 ABHD13Q7L211 337 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 BIVMQ86UB2 503 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 SLC43A2Q8N370 569 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 OR51A4Q8NGJ6 313 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 OR5AK2Q8NH90 309 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 OR14C36Q8NHC7 312 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 NSMAFQ92636 917 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 FGF13Q92913 245 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 CTHRC1Q96CG8 243 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 ASB16Q96NS5 453 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 NKX3-1Q99801 234 aaPredicted RBP12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 LDAHQ9H6V9 325 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 DTX4Q9Y2E6 619 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 HEBP2Q9Y5Z4 205 aa12.24□□□□□ -0.45
SNCAIP-209ENST00000508017 PRSS38A1L453 326 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 H0YGG7 62 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 H7C417 338 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 RBBP9O75884 186 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 RLN2P04090 185 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 MNDAP41218 407 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 TPMTP51580 245 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 ARF3P61204 181 aaPredicted RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 RPS21P63220 83 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 SLC35D3Q5M8T2 416 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 LRFN4Q6PJG9 635 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 CDH26Q8IXH8 852 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 OR51S1Q8NGJ8 323 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 DVL3Q92997 716 aaPredicted RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 ANKRD9Q96BM1 317 aaPredicted RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 MRPS24Q96EL2 167 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 MRPL48Q96GC5 212 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 OR2M4Q96R27 311 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 ULBP3Q9BZM4 244 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 SLITRK2Q9H156 845 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 LYRM4Q9HD34 91 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 TMEM138Q9NPI0 162 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 MED11Q9P086 117 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 MTFP1Q9UDX5 166 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 ETV7Q9Y603 341 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 POM121BA6NF01 834 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 TVP23AA6NH52 213 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 KDM4BO94953 1096 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 CSRP1P21291 193 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 ADPRHP54922 357 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 RIPPLY1Q0D2K3 151 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 ALKBH1Q13686 389 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 UBXN2BQ14CS0 331 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 HYAL4Q2M3T9 481 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 NAXDQ8IW45 347 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 PDZD9Q8IXQ8 264 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 OR5M9Q8NGP3 310 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 OR1E3Q8WZA6 343 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 FAM3CQ92520 227 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 ADAD1Q96M93 576 aaKnown RBP12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 LMAN2LQ9H0V9 348 aa12.23□□□□□ -0.45
SNCAIP-209ENST00000508017 URADA6NGE7 173 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 H7C1C5 153 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 DCTN6O00399 190 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 XRCC3O43542 346 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 LDOC1O95751 146 aaPredicted RBP12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 TIMP1P01033 207 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 ANXA2P07355 339 aaKnown RBP12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 C5AR1P21730 350 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 IL32P24001 234 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 GJA4P35212 333 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 PGDP52209 483 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 LCN6P62502 163 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 TSSK4Q6SA08 328 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 HSD17B13Q7Z5P4 300 aaPredicted RBP12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 CA13Q8N1Q1 262 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 CAMKVQ8NCB2 501 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 TNFAIP8L1Q8WVP5 186 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 CCDC74AQ96AQ1 378 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 POLE3Q9NRF9 147 aa12.22□□□□□ -0.45
SNCAIP-209ENST00000508017 C2orf16Q68DN1 1984 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms