RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 NFYCQ13952 458 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 VMACQ2NL98 169 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 TRMT5Q32P41 509 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 RABL3Q5HYI8 236 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 COQ5Q5HYK3 327 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 AGAP6Q5VW22 663 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF613Q6PF04 617 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF627Q7L945 461 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 ABHD12BQ7Z5M8 362 aaPredicted RBP12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 PRIMA1Q86XR5 153 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 FAM169BQ8N8A8 192 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 SCAIQ8N9R8 606 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 MAPK1IP1LQ8NDC0 245 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 OR10H5Q8NGA6 315 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC38A2Q96QD8 506 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 MCHR1Q99705 422 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 PRSS27Q9BQR3 290 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 CACNG6Q9BXT2 260 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 FAIMQ9NVQ4 179 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 MRPL39Q9NYK5 338 aaKnown RBP12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 CORINQ9Y5Q5 1042 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 DNHD1Q96M86 4753 aa12.18□□□□□ -0.46
PDLIM7-211ENST00000504318 A0A096LPE4 126 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 A0A1W2PPZ6 126 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 PLPP3O14495 311 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 CHP2O43745 196 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 CELA3BP08861 270 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 CECR9P0C854 216 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 CDH2P19022 906 aaPredicted RBP12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 MNAT1P51948 309 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 TUBA1BP68363 451 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 TUBA4AP68366 448 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 KLF10Q13118 480 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 MFSD13AQ14CX5 517 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 CYP51A1Q16850 503 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 ENTPD8Q5MY95 495 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 ANKRD16Q6P6B7 361 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 TUBA1AQ71U36 451 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 C20orf196Q8IYI0 205 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 GTPBP3Q969Y2 492 aaKnown RBP12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 NSL1Q96IY1 281 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 TXNDC15Q96J42 360 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF583Q96ND8 569 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 REG4Q9BYZ8 158 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 LRMDAQ9H2I8 198 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 TMEM27Q9HBJ8 222 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 NOX3Q9HBY0 568 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF224Q9NZL3 707 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 MOKQ9UQ07 419 aa12.17□□□□□ -0.46
PDLIM7-211ENST00000504318 IGHV4-30-2A0A087WSY4 118 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 INAFM1C9JVW0 142 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 H0YHG0 523 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC43A1O75387 559 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 WNT11O96014 354 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 HOXB1P14653 301 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 PRDX6P30041 224 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 SH3BGRP55822 239 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 NCALDP61601 193 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 ARF1P84077 181 aaKnown RBP12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 VEZF1Q14119 521 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 ZNF74Q16587 644 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 CEACAM16Q2WEN9 425 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 REP15Q6BDI9 236 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC46A3Q7Z3Q1 461 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 PATL1Q86TB9 770 aaKnown RBP12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 RANBP3LQ86VV4 465 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC30A8Q8IWU4 369 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 OR8J3Q8NGG0 315 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 ADAMTS16Q8TE57 1224 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 HTRA1Q92743 480 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 LRRC58Q96CX6 371 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 LRR1Q96L50 414 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 RAB3IPQ96QF0 476 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 KATNB1Q9BVA0 655 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 ALG2Q9H553 416 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 CRLF2Q9HC73 371 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 MEPEQ9NQ76 525 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 MED29Q9NX70 200 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 B3GNT2Q9NY97 397 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 TAS2R5Q9NYW4 299 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 CAPN7Q9Y6W3 813 aa12.16□□□□□ -0.46
PDLIM7-211ENST00000504318 CPSF4LA6NMK7 179 aaKnown RBP12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 IGFBP1P08833 259 aaPredicted RBP12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 ASAH2BP0C7U1 165 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 APOBEC3AP31941 199 aaPredicted RBP12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 FABP6P51161 128 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 NAAAQ02083 359 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 HGFACQ04756 655 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 PUDPQ08623 228 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 PXKQ7Z7A4 578 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 OR5J2Q8NH18 312 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 CMTM5Q96DZ9 223 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 EPYCQ99645 322 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 EMC6Q9BV81 110 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 FKRPQ9H9S5 495 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 BARX1Q9HBU1 254 aaPredicted RBP12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 TAGLN3Q9UI15 199 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 ATP23Q9Y6H3 246 aa12.15□□□□□ -0.46
PDLIM7-211ENST00000504318 SLC35F4A4IF30 521 aa12.14□□□□□ -0.47
PDLIM7-211ENST00000504318 ZNF99A8MXY4 864 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms