RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 CRLF2Q9HC73 371 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 GPR35Q9HC97 309 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 MRPL39Q9NYK5 338 aaKnown RBP7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 SLC7A7Q9UM01 511 aa7.39□□□□□ -1.23
HMGXB4-207ENST00000498212 SLC35F4A4IF30 521 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 TRAPPC13A5PLN9 417 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 BBIP1A8MTZ0 92 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 ZNF99A8MXY4 864 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 INAFM1C9JVW0 142 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 LRRN3E7EW58 273 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 H7C417 338 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 M0R3G1 203 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 PLPP3O14495 311 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 MRASO14807 208 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 HPRP00739 348 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 NPPAP01160 153 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 TP53P04637 393 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 VIMP08670 466 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 CECR9P0C854 216 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 CD247P20963 164 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 AHCYP23526 432 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 NAAAQ02083 359 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 SF3A3Q12874 501 aaKnown RBP eCLIP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 KLF10Q13118 480 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 MAPRE2Q15555 327 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 RABL3Q5HYI8 236 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 COQ5Q5HYK3 327 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 PHYHD1Q5SRE7 291 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 CARD17Q5XLA6 110 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 REP15Q6BDI9 236 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 CGB2Q6NT52 195 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 CLEC2AQ6UVW9 174 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 WDR88Q6ZMY6 472 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 CCDC80Q76M96 950 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 PXKQ7Z7A4 578 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 RBM45Q8IUH3 476 aaKnown RBP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 C20orf196Q8IYI0 205 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 TMEM123Q8N131 208 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 OR8J3Q8NGG0 315 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 OR4D11Q8NGI4 311 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 OR5J2Q8NH18 312 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 HTRA1Q92743 480 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 TAMM41Q96BW9 452 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 ZNF837Q96EG3 531 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 TXNDC15Q96J42 360 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 LRR1Q96L50 414 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 ECSITQ9BQ95 431 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 EMC6Q9BV81 110 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 B3GAT2Q9NPZ5 323 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 MED29Q9NX70 200 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 CRNNQ9UBG3 495 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 NOX1Q9Y5S8 564 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 PMF1-BGLAPU3KQ54 211 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 ZFHX3Q15911 3703 aa7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 SETD2Q9BYW2 2564 aaPredicted RBP7.38□□□□□ -1.23
HMGXB4-207ENST00000498212 NF1P21359 2839 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 ZNF726A6NNF4 738 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 C11orf98E9PRG8 122 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 FXYD1O00168 92 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SERPINI2O75830 405 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SEC14L2O76054 403 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 OR6A2O95222 327 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CH25HO95992 272 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 IGKV3-15P01624 115 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 IGLV1-44P01699 117 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 THY1P04216 161 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 ADORA3P0DMS8 318 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CBR1P16152 277 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CALCRP30988 508 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 ARR3P36575 388 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CAPZA2P47755 286 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CRYBA2P53672 197 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 PRSS12P56730 875 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 DSCR9P59020 149 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SNRPD2P62316 118 aaKnown RBP7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 KRTAP1-1Q07627 177 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 NPRL3Q12980 569 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CAMK2DQ13557 499 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 ZNF74Q16587 644 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SWI5Q1ZZU3 235 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 ERICH5Q6P6B1 374 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SNX32Q86XE0 403 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CALHM3Q86XJ0 350 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CCDC36Q8IYA8 594 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 FAM169BQ8N8A8 192 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 PCYOX1LQ8NBM8 494 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 OR10H5Q8NGA6 315 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 OR6N1Q8NGY5 312 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 PROX1Q92786 737 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 FBXO17Q96EF6 278 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 MPP4Q96JB8 637 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 ULBP2Q9BZM5 246 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SLC19A3Q9BZV2 496 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 PCDHAC1Q9H158 963 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SEC61A2Q9H9S3 476 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 SAR1AQ9NR31 198 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 NANSQ9NR45 359 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 CA10Q9NS85 328 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 ZNF446Q9NWS9 450 aa7.37□□□□□ -1.23
HMGXB4-207ENST00000498212 GID8Q9NWU2 228 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms